The 2.0 version of rSNPBase

Variant report

Variant rs57868523
Chromosome Location chr6:24960755-24960756
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:24950400-24988600 Weak transcription Dnd41 blood
2 chr6:24951200-24960800 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr6:24951800-24961600 Weak transcription Spleen Spleen
4 chr6:24952800-24964800 Enhancers Primary T regulatory cells fromperipheralblood blood
5 chr6:24952800-24966600 Enhancers Primary T killer naive cells fromperipheralblood blood
6 chr6:24952800-24973200 Enhancers Primary T helper cells fromperipheralblood blood
7 chr6:24954400-24980800 Weak transcription Thymus Thymus
8 chr6:24958800-24962400 Enhancers Primary Natural Killer cells fromperipheralblood blood
9 chr6:24958800-24963400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
10 chr6:24958800-24964400 Enhancers Primary T cells fromperipheralblood blood
11 chr6:24959000-24963000 Enhancers Primary hematopoietic stem cells short term culture blood
12 chr6:24959200-24962600 Enhancers Primary hematopoietic stem cells blood
13 chr6:24959200-24963600 Enhancers Primary B cells from peripheral blood blood
14 chr6:24959400-24961800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
15 chr6:24959400-24961800 Enhancers Monocytes-CD14+_RO01746 blood
16 chr6:24959400-24965000 Enhancers Primary T cells from cord blood blood
17 chr6:24959800-24961000 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr6:24960000-24961000 Enhancers Primary T helper naive cells from peripheral blood blood
19 chr6:24960000-24961000 Enhancers Primary T killer memory cells from peripheral blood blood
20 chr6:24960000-24961000 Weak transcription Fetal Thymus thymus
21 chr6:24960000-24963000 Enhancers Primary T helper 17 cells PMA-I stimulated --
22 chr6:24960000-24963400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr6:24960000-24966600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
24 chr6:24960200-24961200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr6:24960200-24962200 Enhancers Primary T helper naive cells fromperipheralblood blood
26 chr6:24960600-24961600 Weak transcription Primary B cells from cord blood blood
27 chr6:24960600-24961800 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015