The 2.0 version of rSNPBase

Variant report

Variant rs6907920
Chromosome Location chr6:24952758-24952759
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:24947800-24953600 Weak transcription H9 Cell Line embryonic stem cell
2 chr6:24948400-24954600 Enhancers Fetal Thymus thymus
3 chr6:24948400-24955800 Enhancers Primary monocytes fromperipheralblood blood
4 chr6:24949200-24952800 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
5 chr6:24949200-24952800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
6 chr6:24949200-24953400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
7 chr6:24949400-24953200 Flanking Active TSS Primary T cells from cord blood blood
8 chr6:24949600-24952800 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
9 chr6:24949600-24952800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
10 chr6:24949800-24952800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
11 chr6:24950400-24988600 Weak transcription Dnd41 blood
12 chr6:24950600-24953200 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
13 chr6:24950800-24952800 Flanking Active TSS Primary neutrophils fromperipheralblood blood
14 chr6:24950800-24952800 Flanking Active TSS Primary T helper cells fromperipheralblood blood
15 chr6:24951000-24952800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr6:24951200-24952800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr6:24951200-24953200 Flanking Active TSS Primary B cells from cord blood blood
18 chr6:24951200-24960800 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr6:24951400-24952800 Flanking Active TSS Primary hematopoietic stem cells blood
20 chr6:24951600-24952800 Flanking Active TSS Primary B cells from peripheral blood blood
21 chr6:24951600-24952800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
22 chr6:24951800-24952800 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
23 chr6:24951800-24952800 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
24 chr6:24951800-24952800 Flanking Active TSS GM12878-XiMat blood
25 chr6:24951800-24961600 Weak transcription Spleen Spleen
26 chr6:24952000-24952800 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
27 chr6:24952200-24952800 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
28 chr6:24952400-24952800 Flanking Active TSS Primary T cells fromperipheralblood blood
29 chr6:24952400-24952800 Enhancers Colonic Mucosa Colon
30 chr6:24952400-24954400 Enhancers Thymus Thymus
31 chr6:24952600-24952800 Enhancers iPS-15b Cell Line embryonic stem cell
32 chr6:24952600-24953200 Enhancers Primary hematopoietic stem cells short term culture blood
33 chr6:24952600-24958400 Enhancers Primary T helper 17 cells PMA-I stimulated --

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Last update: Aug 31, 2015