Variant report

Variant	rs57883491
Chromosome Location	chr3:100173747-100173748
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:100119733..100122215-chr3:100171040..100173850,2	K562	blood:

Variant related genes	Relation type
ENSG00000206535	Chromatin interaction
ENSG00000154174	Chromatin interaction

rs_ID	r²[population]
rs73860610	0.93[AFR][1000 genomes]
rs73860636	0.86[AFR][1000 genomes]
rs73860642	0.86[AFR][1000 genomes]
rs73860656	0.86[AFR][1000 genomes]
rs73860659	0.86[AFR][1000 genomes]

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:100144200-100175600	Weak transcription	Psoas Muscle	Psoas
2	chr3:100146400-100177800	Weak transcription	Ovary	ovary
3	chr3:100148200-100182400	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr3:100158400-100176400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr3:100163000-100177200	Weak transcription	HepG2	liver
6	chr3:100163400-100176400	Weak transcription	Fetal Lung	lung
7	chr3:100168600-100176200	Weak transcription	Brain Angular Gyrus	brain
8	chr3:100168800-100174000	Weak transcription	HUES48 Cell Line	embryonic stem cell
9	chr3:100168800-100175600	Weak transcription	Brain Germinal Matrix	brain
10	chr3:100168800-100177800	Weak transcription	Left Ventricle	heart
11	chr3:100169400-100175600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
12	chr3:100169800-100174400	Weak transcription	Fetal Muscle Trunk	muscle
13	chr3:100169800-100176400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
14	chr3:100170000-100174600	Weak transcription	Fetal Muscle Leg	muscle
15	chr3:100170200-100175000	Weak transcription	Fetal Brain Female	brain
16	chr3:100170600-100176400	Weak transcription	Brain Cingulate Gyrus	brain
17	chr3:100170600-100177400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
18	chr3:100170800-100175800	Weak transcription	HUES6 Cell Line	embryonic stem cell
19	chr3:100170800-100175800	Weak transcription	Duodenum Smooth Muscle	Duodenum
20	chr3:100170800-100177400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
21	chr3:100172000-100176400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
22	chr3:100172200-100174200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr3:100172200-100185200	Weak transcription	Aorta	Aorta
24	chr3:100172400-100176200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
25	chr3:100172400-100177600	Weak transcription	Fetal Stomach	stomach
26	chr3:100173000-100177400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
27	chr3:100173200-100174600	Enhancers	iPS-15b Cell Line	embryonic stem cell
28	chr3:100173200-100176000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
29	chr3:100173400-100174400	Enhancers	Fetal Heart	heart
30	chr3:100173600-100173800	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
31	chr3:100173600-100173800	Enhancers	Liver	Liver

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