The 2.0 version of rSNPBase

Variant report

Variant rs73860610
Chromosome Location chr3:100130846-100130847
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:100121800-100131000 Weak transcription Psoas Muscle Psoas
2 chr3:100122000-100143800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr3:100122400-100132400 Weak transcription Primary T cells from cord blood blood
4 chr3:100122600-100132400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr3:100122600-100133600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr3:100122600-100149200 Weak transcription Left Ventricle heart
7 chr3:100122800-100131600 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr3:100123000-100131600 Weak transcription Fetal Heart heart
9 chr3:100123000-100131600 Weak transcription HSMM muscle
10 chr3:100123000-100131800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr3:100123000-100132600 Weak transcription H9 Cell Line embryonic stem cell
12 chr3:100123000-100133600 Weak transcription Stomach Smooth Muscle stomach
13 chr3:100123200-100133600 Weak transcription A549 lung
14 chr3:100123200-100135400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr3:100123400-100132000 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr3:100123400-100132000 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr3:100123400-100132000 Weak transcription iPS-20b Cell Line embryonic stem cell
18 chr3:100124200-100143600 Weak transcription Hela-S3 cervix
19 chr3:100126400-100133200 Weak transcription Brain Hippocampus Middle brain
20 chr3:100126400-100143200 Weak transcription Duodenum Mucosa Duodenum
21 chr3:100126600-100131000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr3:100126600-100139800 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr3:100127400-100131800 Weak transcription HUES48 Cell Line embryonic stem cell
24 chr3:100127400-100131800 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr3:100127400-100132200 Weak transcription H1 Cell Line embryonic stem cell
26 chr3:100127400-100133000 Weak transcription Pancreatic Islets Pancreatic Islet
27 chr3:100127400-100134200 Weak transcription Gastric stomach
28 chr3:100127400-100139000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr3:100127400-100144200 Weak transcription Pancreas Pancrea
30 chr3:100127600-100131800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr3:100127600-100134800 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr3:100127600-100137800 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr3:100127600-100146200 Weak transcription Ovary ovary
34 chr3:100127600-100148200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr3:100127800-100132000 Weak transcription iPS-15b Cell Line embryonic stem cell
36 chr3:100129000-100131000 Enhancers HepG2 liver
37 chr3:100129400-100131000 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr3:100129400-100131200 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
39 chr3:100129400-100132400 ZNF genes & repeats Fetal Muscle Leg muscle
40 chr3:100129600-100131200 Strong transcription Aorta Aorta
41 chr3:100129800-100131000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr3:100129800-100131400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr3:100129800-100131400 Strong transcription Fetal Stomach stomach
44 chr3:100130200-100131200 Strong transcription iPS-18 Cell Line embryonic stem cell
45 chr3:100130200-100131400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
46 chr3:100130200-100135400 Weak transcription Fetal Intestine Large intestine
47 chr3:100130600-100131600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr3:100130600-100131600 Weak transcription Brain Germinal Matrix brain
49 chr3:100130600-100136000 Weak transcription Fetal Lung lung
50 chr3:100130600-100139000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015