The 2.0 version of rSNPBase

Variant report

Variant rs57895932
Chromosome Location chr19:44580758-44580759
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:44577000-44581600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr19:44577000-44581800 Weak transcription Lung lung
3 chr19:44577000-44585000 Weak transcription Pancreas Pancrea
4 chr19:44577000-44598000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr19:44577200-44581200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr19:44577200-44581400 Weak transcription Fetal Intestine Large intestine
7 chr19:44577200-44584200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr19:44577200-44584800 Weak transcription Right Ventricle heart
9 chr19:44577200-44585000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr19:44577200-44585000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr19:44577200-44585000 Weak transcription Colonic Mucosa Colon
12 chr19:44577200-44585000 Weak transcription Esophagus oesophagus
13 chr19:44577200-44586200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr19:44577200-44586200 Weak transcription Rectal Smooth Muscle rectum
15 chr19:44577200-44586200 Weak transcription HUVEC blood vessel
16 chr19:44577200-44588000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
17 chr19:44577200-44588200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr19:44577200-44590000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr19:44577200-44598000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
20 chr19:44577400-44581000 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr19:44577400-44581000 Weak transcription Fetal Muscle Trunk muscle
22 chr19:44577400-44581400 Weak transcription Primary T cells fromperipheralblood blood
23 chr19:44577400-44581400 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr19:44577400-44582000 Weak transcription Fetal Intestine Small intestine
25 chr19:44577400-44582000 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr19:44577400-44582600 Weak transcription Left Ventricle heart
27 chr19:44577400-44582600 Weak transcription Osteobl bone
28 chr19:44577400-44583000 Weak transcription Primary T cells from cord blood blood
29 chr19:44577400-44584200 Weak transcription Aorta Aorta
30 chr19:44577400-44584200 Weak transcription Colon Smooth Muscle Colon
31 chr19:44577400-44584200 Weak transcription Fetal Thymus thymus
32 chr19:44577400-44584200 Weak transcription Ovary ovary
33 chr19:44577400-44584200 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr19:44577400-44584200 Weak transcription Spleen Spleen
35 chr19:44577400-44584800 Weak transcription H1 Cell Line embryonic stem cell
36 chr19:44577400-44584800 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr19:44577400-44584800 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr19:44577400-44584800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr19:44577400-44584800 Weak transcription Brain Angular Gyrus brain
40 chr19:44577400-44584800 Weak transcription Brain Cingulate Gyrus brain
41 chr19:44577400-44584800 Weak transcription Brain Hippocampus Middle brain
42 chr19:44577400-44585000 Weak transcription Primary hematopoietic stem cells blood
43 chr19:44577400-44585000 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr19:44577400-44585000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr19:44577400-44585000 Weak transcription Small Intestine intestine
46 chr19:44577400-44585200 Weak transcription Primary T helper naive cells from peripheral blood blood
47 chr19:44577400-44586200 Weak transcription H9 Cell Line embryonic stem cell
48 chr19:44577400-44586400 Weak transcription Primary T killer memory cells from peripheral blood blood
49 chr19:44577400-44589200 Weak transcription NH-A brain
50 chr19:44577600-44580800 Weak transcription Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015