The 2.0 version of rSNPBase

Variant report

Variant rs6509135
Chromosome Location chr19:44562096-44562097
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:44556600-44564600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr19:44557000-44565000 Weak transcription Psoas Muscle Psoas
3 chr19:44557000-44566800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr19:44557000-44567400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr19:44557000-44567400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr19:44557000-44567600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr19:44557000-44568800 Weak transcription HMEC breast
8 chr19:44557000-44570200 Weak transcription HUVEC blood vessel
9 chr19:44557000-44570200 Weak transcription NHDF-Ad bronchial
10 chr19:44557000-44575600 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr19:44557200-44562600 Weak transcription Placenta Amnion Placenta Amnion
12 chr19:44557200-44565600 Weak transcription NHLF lung
13 chr19:44557400-44564400 Weak transcription Fetal Heart heart
14 chr19:44557400-44565000 Weak transcription Small Intestine intestine
15 chr19:44557400-44565000 Weak transcription NH-A brain
16 chr19:44557400-44570000 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr19:44557400-44570200 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr19:44557600-44564800 Weak transcription Fetal Brain Male brain
19 chr19:44558200-44571800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr19:44558200-44573200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr19:44558200-44575600 ZNF genes & repeats Liver Liver
22 chr19:44558800-44563800 Strong transcription Rectal Mucosa Donor 29 rectum
23 chr19:44558800-44567800 Strong transcription Stomach Smooth Muscle stomach
24 chr19:44558800-44572800 ZNF genes & repeats Primary hematopoietic stem cells blood
25 chr19:44559000-44565200 ZNF genes & repeats Primary monocytes fromperipheralblood blood
26 chr19:44559200-44563000 Strong transcription Ovary ovary
27 chr19:44559200-44569000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr19:44559200-44569000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr19:44559200-44569400 Strong transcription Fetal Stomach stomach
30 chr19:44559400-44565400 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr19:44559400-44565800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
32 chr19:44559400-44569400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr19:44559400-44570000 Weak transcription Stomach Mucosa stomach
34 chr19:44559600-44563600 Strong transcription Adipose Nuclei Adipose
35 chr19:44559600-44565800 Strong transcription Colonic Mucosa Colon
36 chr19:44559800-44563200 Strong transcription Colon Smooth Muscle Colon
37 chr19:44559800-44563600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
38 chr19:44559800-44568600 Strong transcription HSMMtube muscle
39 chr19:44560000-44562400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
40 chr19:44560000-44563600 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
41 chr19:44560000-44568800 Strong transcription HUES64 Cell Line embryonic stem cell
42 chr19:44560200-44567200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr19:44560400-44562200 Weak transcription Primary T helper cells fromperipheralblood blood
44 chr19:44560400-44563200 Weak transcription Fetal Kidney kidney
45 chr19:44560400-44564600 Weak transcription Primary B cells from cord blood blood
46 chr19:44560400-44564600 Weak transcription Primary B cells from peripheral blood blood
47 chr19:44560400-44566400 Weak transcription Fetal Thymus thymus
48 chr19:44560400-44566800 Weak transcription NHEK skin
49 chr19:44560800-44569400 Strong transcription Fetal Intestine Large intestine
50 chr19:44560800-44570000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015