Variant report

Variant	rs57901166
Chromosome Location	chr14:84504876-84504877
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11848692	1.00[EUR][1000 genomes]
rs56109438	0.84[AFR][1000 genomes]
rs57204377	0.84[AFR][1000 genomes]
rs57308756	0.84[AFR][1000 genomes]
rs59534087	0.84[AFR][1000 genomes]
rs60273320	1.00[EUR][1000 genomes]
rs60430639	0.84[AFR][1000 genomes]
rs61585873	1.00[EUR][1000 genomes]
rs7152485	1.00[EUR][1000 genomes]
rs7152670	0.88[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7158786	1.00[EUR][1000 genomes]
rs7159190	1.00[EUR][1000 genomes]
rs72699265	0.82[AFR][1000 genomes]
rs74069046	0.88[AFR][1000 genomes]
rs74071144	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1382	chr14:84487547-84532237	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84504200-84507600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr14:84504200-84508200	Weak transcription	Fetal Heart	heart

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links