Variant report

Variant	rs57204377
Chromosome Location	chr14:84453720-84453721
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 67 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:65)

rs_ID	r²[population]
rs10484123	0.86[EUR][1000 genomes]
rs17119411	0.86[EUR][1000 genomes]
rs17119414	0.86[EUR][1000 genomes]
rs17119419	0.86[EUR][1000 genomes]
rs17119425	0.86[EUR][1000 genomes]
rs17119427	0.86[EUR][1000 genomes]
rs17119428	0.86[EUR][1000 genomes]
rs17119435	0.86[EUR][1000 genomes]
rs17119438	0.86[EUR][1000 genomes]
rs17119440	0.86[EUR][1000 genomes]
rs17119443	0.86[EUR][1000 genomes]
rs2372555	0.86[EUR][1000 genomes]
rs2372557	0.86[EUR][1000 genomes]
rs2372558	0.86[EUR][1000 genomes]
rs2372559	0.86[EUR][1000 genomes]
rs4258535	0.86[EUR][1000 genomes]
rs4343201	0.86[EUR][1000 genomes]
rs4502139	0.86[EUR][1000 genomes]
rs4562984	0.86[EUR][1000 genomes]
rs56109438	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57308756	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57901166	0.84[AFR][1000 genomes]
rs59534087	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60430639	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61585873	0.83[AFR][1000 genomes]
rs7152670	0.86[AFR][1000 genomes]
rs72699257	0.87[EUR][1000 genomes]
rs72699260	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72699265	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72699278	0.93[EUR][1000 genomes]
rs72699280	0.93[EUR][1000 genomes]
rs72699290	0.86[EUR][1000 genomes]
rs72699293	0.86[EUR][1000 genomes]
rs72699294	0.93[EUR][1000 genomes]
rs72699295	0.86[EUR][1000 genomes]
rs72699297	0.93[EUR][1000 genomes]
rs72699300	0.86[EUR][1000 genomes]
rs72701003	0.86[EUR][1000 genomes]
rs72701006	0.86[EUR][1000 genomes]
rs72701011	0.86[EUR][1000 genomes]
rs72701012	0.86[EUR][1000 genomes]
rs72701014	0.86[EUR][1000 genomes]
rs72701015	0.86[EUR][1000 genomes]
rs72701016	0.85[EUR][1000 genomes]
rs72701018	0.86[EUR][1000 genomes]
rs72701019	0.93[EUR][1000 genomes]
rs72701023	0.86[EUR][1000 genomes]
rs72701024	0.86[EUR][1000 genomes]
rs72701025	0.86[EUR][1000 genomes]
rs72701026	0.86[EUR][1000 genomes]
rs72701027	0.86[EUR][1000 genomes]
rs72701029	0.86[EUR][1000 genomes]
rs72701030	0.80[EUR][1000 genomes]
rs72701031	0.93[EUR][1000 genomes]
rs72701032	0.93[EUR][1000 genomes]
rs72701034	0.93[EUR][1000 genomes]
rs72701040	0.93[EUR][1000 genomes]
rs72701043	0.93[EUR][1000 genomes]
rs74071144	0.85[AFR][1000 genomes]
rs8004309	0.86[EUR][1000 genomes]
rs8004623	0.86[EUR][1000 genomes]
rs8004926	0.86[EUR][1000 genomes]
rs8009976	0.86[EUR][1000 genomes]
rs8010352	0.86[EUR][1000 genomes]
rs8010667	0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1039271	chr14:84405561-84467550	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a
2	nsv974291	chr14:84447572-84460362	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84453000-84455600	Enhancers	Primary neutrophils fromperipheralblood	blood
2	chr14:84453400-84454600	Weak transcription	Monocytes-CD14+_RO01746	blood

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