Variant report

Variant	rs72701040
Chromosome Location	chr14:84493730-84493731
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:84493242..84495734-chr14:84508485..84511044,2	K562	blood:

Extended variants
information (count: 66 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:65)

rs_ID	r²[population]
rs10484123	0.93[EUR][1000 genomes]
rs17119411	0.93[EUR][1000 genomes]
rs17119414	0.93[EUR][1000 genomes]
rs17119419	0.93[EUR][1000 genomes]
rs17119425	0.93[EUR][1000 genomes]
rs17119427	0.93[EUR][1000 genomes]
rs17119428	0.93[EUR][1000 genomes]
rs17119435	0.93[EUR][1000 genomes]
rs17119438	0.93[EUR][1000 genomes]
rs17119440	0.93[EUR][1000 genomes]
rs17119443	0.93[EUR][1000 genomes]
rs2372555	0.93[EUR][1000 genomes]
rs2372557	0.93[EUR][1000 genomes]
rs2372558	0.93[EUR][1000 genomes]
rs2372559	0.93[EUR][1000 genomes]
rs4258535	0.93[EUR][1000 genomes]
rs4343201	0.93[EUR][1000 genomes]
rs4502139	0.93[EUR][1000 genomes]
rs4562984	0.93[EUR][1000 genomes]
rs56109438	0.93[EUR][1000 genomes]
rs57204377	0.93[EUR][1000 genomes]
rs57308756	0.93[EUR][1000 genomes]
rs59534087	0.93[EUR][1000 genomes]
rs60430639	0.93[EUR][1000 genomes]
rs72699253	1.00[AMR][1000 genomes]
rs72699257	0.81[EUR][1000 genomes]
rs72699260	0.86[EUR][1000 genomes]
rs72699265	0.86[EUR][1000 genomes]
rs72699271	1.00[AMR][1000 genomes]
rs72699278	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72699280	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72699290	0.93[EUR][1000 genomes]
rs72699293	0.93[EUR][1000 genomes]
rs72699294	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72699295	0.93[EUR][1000 genomes]
rs72699297	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72699300	0.93[EUR][1000 genomes]
rs72701003	0.93[EUR][1000 genomes]
rs72701006	0.93[EUR][1000 genomes]
rs72701011	0.93[EUR][1000 genomes]
rs72701012	0.93[EUR][1000 genomes]
rs72701014	0.93[EUR][1000 genomes]
rs72701015	0.93[EUR][1000 genomes]
rs72701016	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72701018	0.93[EUR][1000 genomes]
rs72701019	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72701023	0.93[EUR][1000 genomes]
rs72701024	0.93[EUR][1000 genomes]
rs72701025	0.93[EUR][1000 genomes]
rs72701026	0.93[EUR][1000 genomes]
rs72701027	1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72701029	0.93[EUR][1000 genomes]
rs72701030	0.86[EUR][1000 genomes]
rs72701031	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72701032	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72701034	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72701043	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72701071	1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs72703212	1.00[AMR][1000 genomes]
rs8004309	0.93[EUR][1000 genomes]
rs8004623	0.93[EUR][1000 genomes]
rs8004926	0.93[EUR][1000 genomes]
rs8009976	0.93[EUR][1000 genomes]
rs8010352	0.93[EUR][1000 genomes]
rs8010667	0.93[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1382	chr14:84487547-84532237	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84489800-84493800	Weak transcription	Fetal Stomach	stomach
2	chr14:84492200-84495400	Weak transcription	Fetal Lung	lung
3	chr14:84493600-84495200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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