Variant report

Variant	rs17119438
Chromosome Location	chr14:84473011-84473012
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 77 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:77)

rs_ID	r²[population]
rs10484123	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17094350	0.95[AFR][1000 genomes]
rs17119377	0.84[AFR][1000 genomes]
rs17119387	0.84[AFR][1000 genomes]
rs17119411	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17119414	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17119419	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17119425	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17119427	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17119428	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17119435	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17119437	0.95[AFR][1000 genomes]
rs17119440	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17119443	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17119458	0.95[AFR][1000 genomes]
rs17119468	0.95[AFR][1000 genomes]
rs17119485	0.84[AFR][1000 genomes]
rs17119497	0.84[AFR][1000 genomes]
rs2372555	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2372556	0.89[AFR][1000 genomes]
rs2372557	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2372558	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2372559	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4258535	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4343201	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs4502139	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4562984	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56109438	0.86[EUR][1000 genomes]
rs57204377	0.86[EUR][1000 genomes]
rs57308756	0.86[EUR][1000 genomes]
rs59534087	0.86[EUR][1000 genomes]
rs60430639	0.86[EUR][1000 genomes]
rs6574765	0.84[AFR][1000 genomes]
rs6574766	0.84[AFR][1000 genomes]
rs7144926	0.84[AFR][1000 genomes]
rs7150612	0.84[AFR][1000 genomes]
rs7152811	0.95[AFR][1000 genomes]
rs72699257	0.87[EUR][1000 genomes]
rs72699260	0.80[EUR][1000 genomes]
rs72699265	0.80[EUR][1000 genomes]
rs72699278	0.93[EUR][1000 genomes]
rs72699280	0.93[EUR][1000 genomes]
rs72699290	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72699293	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72699294	0.93[EUR][1000 genomes]
rs72699295	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72699297	0.93[EUR][1000 genomes]
rs72699300	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72701003	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72701006	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72701011	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72701012	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72701014	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72701015	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72701016	0.85[EUR][1000 genomes]
rs72701018	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72701019	0.93[EUR][1000 genomes]
rs72701023	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72701024	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72701025	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72701026	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72701027	0.95[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs72701029	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72701030	0.95[AFR][1000 genomes];0.93[EUR][1000 genomes]
rs72701031	0.93[EUR][1000 genomes]
rs72701032	0.93[EUR][1000 genomes]
rs72701034	0.93[EUR][1000 genomes]
rs72701040	0.93[EUR][1000 genomes]
rs72701043	0.93[EUR][1000 genomes]
rs8004309	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8004623	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8004926	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8009976	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8010331	0.95[AFR][1000 genomes]
rs8010352	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8010667	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs8014313	0.84[AFR][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84470600-84473800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr14:84472400-84473400	Enhancers	Adipose Nuclei	Adipose
3	chr14:84472400-84474000	Enhancers	HUVEC	blood vessel
4	chr14:84473000-84473400	Enhancers	HUES64 Cell Line	embryonic stem cell

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