Variant report

Variant	rs72699260
Chromosome Location	chr14:84443610-84443611
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 63 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:61)

rs_ID	r²[population]
rs10484123	0.80[EUR][1000 genomes]
rs17119411	0.80[EUR][1000 genomes]
rs17119414	0.80[EUR][1000 genomes]
rs17119419	0.80[EUR][1000 genomes]
rs17119425	0.80[EUR][1000 genomes]
rs17119427	0.80[EUR][1000 genomes]
rs17119428	0.80[EUR][1000 genomes]
rs17119435	0.80[EUR][1000 genomes]
rs17119438	0.80[EUR][1000 genomes]
rs17119440	0.80[EUR][1000 genomes]
rs17119443	0.80[EUR][1000 genomes]
rs2372555	0.80[EUR][1000 genomes]
rs2372557	0.80[EUR][1000 genomes]
rs2372558	0.80[EUR][1000 genomes]
rs2372559	0.80[EUR][1000 genomes]
rs4258535	0.80[EUR][1000 genomes]
rs4343201	0.80[EUR][1000 genomes]
rs4502139	0.80[EUR][1000 genomes]
rs4562984	0.80[EUR][1000 genomes]
rs56109438	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs57204377	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs57308756	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs59534087	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs60430639	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs61585873	0.96[AFR][1000 genomes]
rs72699257	0.94[EUR][1000 genomes]
rs72699265	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs72699278	0.86[EUR][1000 genomes]
rs72699280	0.86[EUR][1000 genomes]
rs72699290	0.80[EUR][1000 genomes]
rs72699293	0.80[EUR][1000 genomes]
rs72699294	0.86[EUR][1000 genomes]
rs72699295	0.80[EUR][1000 genomes]
rs72699297	0.86[EUR][1000 genomes]
rs72699300	0.80[EUR][1000 genomes]
rs72701003	0.80[EUR][1000 genomes]
rs72701006	0.80[EUR][1000 genomes]
rs72701011	0.80[EUR][1000 genomes]
rs72701012	0.80[EUR][1000 genomes]
rs72701014	0.80[EUR][1000 genomes]
rs72701015	0.80[EUR][1000 genomes]
rs72701018	0.80[EUR][1000 genomes]
rs72701019	0.86[EUR][1000 genomes]
rs72701023	0.80[EUR][1000 genomes]
rs72701024	0.80[EUR][1000 genomes]
rs72701025	0.80[EUR][1000 genomes]
rs72701026	0.80[EUR][1000 genomes]
rs72701027	0.80[EUR][1000 genomes]
rs72701029	0.80[EUR][1000 genomes]
rs72701031	0.86[EUR][1000 genomes]
rs72701032	0.86[EUR][1000 genomes]
rs72701034	0.86[EUR][1000 genomes]
rs72701040	0.86[EUR][1000 genomes]
rs72701043	0.86[EUR][1000 genomes]
rs74071144	0.98[AFR][1000 genomes]
rs8004309	0.80[EUR][1000 genomes]
rs8004623	0.80[EUR][1000 genomes]
rs8004926	0.80[EUR][1000 genomes]
rs8009976	0.80[EUR][1000 genomes]
rs8010352	0.80[EUR][1000 genomes]
rs8010667	0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902159	chr14:84336944-84447356	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv1039271	chr14:84405561-84467550	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84440600-84444200	Enhancers	Fetal Heart	heart
2	chr14:84442200-84448000	Weak transcription	Stomach Mucosa	stomach
3	chr14:84443000-84446800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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