Variant report

Variant	rs57948317
Chromosome Location	chr9:73469408-73469409
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs58857130	1.00[AMR][1000 genomes]
rs58948495	1.00[AMR][1000 genomes]
rs59518319	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59557470	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73461962	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73463910	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73467830	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73467836	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73467840	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73467851	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73467858	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73467866	1.00[AMR][1000 genomes]
rs73467872	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73467880	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73427600-73483400	Weak transcription	Aorta	Aorta
2	chr9:73448200-73473600	Weak transcription	Fetal Kidney	kidney
3	chr9:73450600-73477600	Weak transcription	Ovary	ovary
4	chr9:73452000-73469600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
5	chr9:73455600-73480600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr9:73457200-73485200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
7	chr9:73457800-73480600	Weak transcription	Cortex derived primary cultured neurospheres	brain
8	chr9:73461400-73482000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
9	chr9:73463600-73471000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr9:73463600-73472800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
11	chr9:73466200-73483000	Weak transcription	Fetal Heart	heart
12	chr9:73468400-73469600	Enhancers	Pancreatic Islets	Pancreatic Islet
13	chr9:73469200-73469800	Enhancers	H1 Cell Line	embryonic stem cell
14	chr9:73469200-73470000	Enhancers	iPS-18 Cell Line	embryonic stem cell
15	chr9:73469200-73470400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr9:73469400-73470000	Enhancers	HUES64 Cell Line	embryonic stem cell
17	chr9:73469400-73470200	Weak transcription	HUES48 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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