Variant report

Variant	rs73467851
Chromosome Location	chr9:73462404-73462405
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs57948317	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58857130	1.00[AMR][1000 genomes]
rs58948495	1.00[AMR][1000 genomes]
rs59518319	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59557470	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73461962	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73463910	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73467830	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73467836	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73467840	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73467858	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73467866	1.00[AMR][1000 genomes]
rs73467872	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73467880	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1803911	chr9:73461480-73466355	Strong transcription Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
2	esv1813440	chr9:73461480-73466355	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73427600-73483400	Weak transcription	Aorta	Aorta
2	chr9:73448200-73473600	Weak transcription	Fetal Kidney	kidney
3	chr9:73448400-73469000	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr9:73450600-73477600	Weak transcription	Ovary	ovary
5	chr9:73452000-73469600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
6	chr9:73455600-73480600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr9:73457200-73485200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr9:73457800-73480600	Weak transcription	Cortex derived primary cultured neurospheres	brain
9	chr9:73461400-73482000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr9:73462200-73463600	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr9:73462400-73462600	Strong transcription	Breast Myoepithelial Primary Cells	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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