The 2.0 version of rSNPBase

Variant report

Variant rs58081798
Chromosome Location chr4:149030742-149030743
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:148992200-149035000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr4:148998400-149032600 Weak transcription Primary B cells from peripheral blood blood
3 chr4:149002600-149036600 Weak transcription Placenta Amnion Placenta Amnion
4 chr4:149004600-149052400 Weak transcription Esophagus oesophagus
5 chr4:149012600-149037400 Weak transcription NHLF lung
6 chr4:149013200-149034800 Weak transcription Brain Angular Gyrus brain
7 chr4:149013600-149034600 Weak transcription Brain Hippocampus Middle brain
8 chr4:149015600-149037600 Weak transcription Colon Smooth Muscle Colon
9 chr4:149018000-149085800 Weak transcription Stomach Mucosa stomach
10 chr4:149020800-149042400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr4:149022400-149042600 Weak transcription Small Intestine intestine
12 chr4:149022800-149034600 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr4:149023400-149034800 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr4:149024000-149041000 Weak transcription Fetal Kidney kidney
15 chr4:149024000-149068600 Weak transcription Right Ventricle heart
16 chr4:149024600-149040200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr4:149024800-149039000 Weak transcription Gastric stomach
18 chr4:149026000-149037600 Weak transcription Fetal Lung lung
19 chr4:149026200-149032800 Weak transcription Primary T killer naive cells fromperipheralblood blood
20 chr4:149026200-149039200 Weak transcription Psoas Muscle Psoas
21 chr4:149026200-149042000 Weak transcription Fetal Heart heart
22 chr4:149026200-149044600 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr4:149028000-149033000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr4:149028400-149044200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr4:149028800-149030800 Strong transcription Primary T helper naive cells fromperipheralblood blood
26 chr4:149028800-149030800 Strong transcription Brain Inferior Temporal Lobe brain
27 chr4:149028800-149030800 Strong transcription Pancreas Pancrea
28 chr4:149028800-149031200 Strong transcription Left Ventricle heart
29 chr4:149028800-149031600 Strong transcription Duodenum Smooth Muscle Duodenum
30 chr4:149028800-149031600 Strong transcription Stomach Smooth Muscle stomach
31 chr4:149028800-149036800 Strong transcription Rectal Mucosa Donor 31 rectum
32 chr4:149029200-149032400 Strong transcription Primary T helper cells fromperipheralblood blood
33 chr4:149029200-149033200 Strong transcription Primary T helper cells PMA-I stimulated --
34 chr4:149029400-149030800 Strong transcription Brain Anterior Caudate brain
35 chr4:149029400-149030800 Strong transcription Skeletal Muscle Male skeletal muscle
36 chr4:149029400-149031200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr4:149029400-149031600 Strong transcription Lung lung
38 chr4:149029400-149031600 Strong transcription Rectal Smooth Muscle rectum
39 chr4:149029400-149032800 Strong transcription Primary T cells fromperipheralblood blood
40 chr4:149029400-149035600 Strong transcription Adipose Nuclei Adipose
41 chr4:149029400-149036200 Strong transcription Rectal Mucosa Donor 29 rectum
42 chr4:149029400-149036800 Weak transcription HUVEC blood vessel
43 chr4:149029400-149038400 Weak transcription Thymus Thymus
44 chr4:149029600-149030800 Enhancers HSMM muscle
45 chr4:149029600-149031000 Strong transcription Breast Myoepithelial Primary Cells Breast
46 chr4:149029600-149031000 Strong transcription Primary T helper naive cells from peripheral blood blood
47 chr4:149029600-149031000 Enhancers HSMMtube muscle
48 chr4:149029600-149031400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
49 chr4:149029600-149031600 Strong transcription Brain Cingulate Gyrus brain
50 chr4:149029600-149036200 Strong transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015