The 2.0 version of rSNPBase

Variant report

Variant rs72959798
Chromosome Location chr4:149025133-149025134
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:148992200-149035000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr4:148997800-149028800 Weak transcription Pancreas Pancrea
3 chr4:148998400-149032600 Weak transcription Primary B cells from peripheral blood blood
4 chr4:148999200-149029600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr4:149002200-149029400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr4:149002600-149036600 Weak transcription Placenta Amnion Placenta Amnion
7 chr4:149003000-149028800 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr4:149003000-149029200 Weak transcription Primary T helper cells fromperipheralblood blood
9 chr4:149003200-149025400 Weak transcription Primary T cells fromperipheralblood blood
10 chr4:149003400-149027200 Weak transcription Fetal Intestine Large intestine
11 chr4:149003800-149029400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr4:149004000-149029200 Weak transcription Primary T helper cells PMA-I stimulated --
13 chr4:149004600-149052400 Weak transcription Esophagus oesophagus
14 chr4:149012600-149029600 Weak transcription Colonic Mucosa Colon
15 chr4:149012600-149037400 Weak transcription NHLF lung
16 chr4:149013200-149034800 Weak transcription Brain Angular Gyrus brain
17 chr4:149013400-149025600 Weak transcription Adipose Nuclei Adipose
18 chr4:149013400-149028800 Weak transcription Brain Inferior Temporal Lobe brain
19 chr4:149013600-149029400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr4:149013600-149034600 Weak transcription Brain Hippocampus Middle brain
21 chr4:149014400-149029600 Weak transcription Spleen Spleen
22 chr4:149014600-149029400 Weak transcription Fetal Muscle Trunk muscle
23 chr4:149014600-149029400 Weak transcription Lung lung
24 chr4:149015400-149029600 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr4:149015600-149037600 Weak transcription Colon Smooth Muscle Colon
26 chr4:149016600-149026400 Strong transcription Rectal Mucosa Donor 31 rectum
27 chr4:149017000-149029800 Weak transcription Ovary ovary
28 chr4:149018000-149085800 Weak transcription Stomach Mucosa stomach
29 chr4:149020600-149029800 Weak transcription Aorta Aorta
30 chr4:149020800-149042400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr4:149022400-149042600 Weak transcription Small Intestine intestine
32 chr4:149022800-149034600 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr4:149023000-149026400 Strong transcription Duodenum Mucosa Duodenum
34 chr4:149023000-149026400 Strong transcription Rectal Mucosa Donor 29 rectum
35 chr4:149023000-149026600 Strong transcription Breast Myoepithelial Primary Cells Breast
36 chr4:149023400-149025200 Enhancers Right Atrium heart
37 chr4:149023400-149026200 Strong transcription Sigmoid Colon Sigmoid Colon
38 chr4:149023400-149029600 Weak transcription Brain Cingulate Gyrus brain
39 chr4:149023400-149034800 Weak transcription Pancreatic Islets Pancreatic Islet
40 chr4:149023800-149026200 Strong transcription Fetal Muscle Leg muscle
41 chr4:149023800-149026200 Enhancers Left Ventricle heart
42 chr4:149024000-149025400 Enhancers Fetal Lung lung
43 chr4:149024000-149041000 Weak transcription Fetal Kidney kidney
44 chr4:149024000-149068600 Weak transcription Right Ventricle heart
45 chr4:149024200-149029600 Weak transcription Primary T helper naive cells from peripheral blood blood
46 chr4:149024400-149030200 Weak transcription Liver Liver
47 chr4:149024600-149030200 Weak transcription Fetal Intestine Small intestine
48 chr4:149024600-149040200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
49 chr4:149024800-149025800 Weak transcription Rectal Smooth Muscle rectum
50 chr4:149024800-149026000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015