Variant report

Variant rs58087484
Chromosome Location chr1:151879939-151879940
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:151831000-151881400 Weak transcription Ovary ovary
2 chr1:151841200-151880800 Weak transcription NHLF lung
3 chr1:151844400-151881200 Weak transcription Aorta Aorta
4 chr1:151854000-151880200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr1:151862400-151880400 Weak transcription Colon Smooth Muscle Colon
6 chr1:151864800-151881400 Weak transcription Brain Substantia Nigra brain
7 chr1:151866200-151880200 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr1:151868000-151880200 Weak transcription Brain Hippocampus Middle brain
9 chr1:151868000-151880400 Weak transcription Stomach Smooth Muscle stomach
10 chr1:151868000-151880800 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr1:151871400-151880400 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr1:151872800-151880800 Weak transcription Right Atrium heart
13 chr1:151873000-151880800 Weak transcription Brain Cingulate Gyrus brain
14 chr1:151874800-151880400 Weak transcription Brain Anterior Caudate brain
15 chr1:151876600-151881400 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr1:151877000-151880800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr1:151877600-151881000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
18 chr1:151877800-151880200 Weak transcription Breast Myoepithelial Primary Cells Breast
19 chr1:151878000-151880800 Genic enhancers Primary T cells fromperipheralblood blood
20 chr1:151878200-151880200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
21 chr1:151878200-151880800 Weak transcription NH-A brain
22 chr1:151878200-151881000 ZNF genes & repeats H1 Cell Line embryonic stem cell
23 chr1:151878200-151881200 Weak transcription Fetal Heart heart
24 chr1:151878400-151880200 Enhancers Primary T helper 17 cells PMA-I stimulated --
25 chr1:151878400-151880600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr1:151878400-151880800 Enhancers Primary T killer naive cells fromperipheralblood blood
27 chr1:151878400-151880800 Weak transcription Osteobl bone
28 chr1:151878400-151881000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
29 chr1:151878400-151881000 ZNF genes & repeats Placenta Placenta
30 chr1:151878600-151880200 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr1:151878600-151880600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr1:151878600-151880800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr1:151878600-151880800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr1:151878600-151881000 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
35 chr1:151878800-151880000 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr1:151878800-151880000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr1:151878800-151881000 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr1:151878800-151881000 ZNF genes & repeats Thymus Thymus
39 chr1:151879000-151880200 Weak transcription Gastric stomach
40 chr1:151879000-151880400 Weak transcription Pancreas Pancrea
41 chr1:151879000-151880600 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
42 chr1:151879000-151880600 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr1:151879000-151881600 Weak transcription Placenta Amnion Placenta Amnion
44 chr1:151879200-151880000 Genic enhancers Primary T killer memory cells from peripheral blood blood
45 chr1:151879200-151880000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr1:151879200-151880000 Weak transcription Left Ventricle heart
47 chr1:151879200-151880400 Weak transcription Right Ventricle heart
48 chr1:151879200-151880600 Genic enhancers Primary T helper naive cells from peripheral blood blood
49 chr1:151879200-151881000 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
50 chr1:151879200-151881000 ZNF genes & repeats Fetal Intestine Small intestine

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