The 2.0 version of rSNPBase

Variant report

Variant rs6662602
Chromosome Location chr1:151915155-151915156
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:75 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:151907000-151917400 Weak transcription Right Atrium heart
2 chr1:151907600-151916800 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr1:151908200-151916600 Weak transcription Placenta Placenta
4 chr1:151908200-151917000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:151909400-151916800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr1:151909400-151917000 Weak transcription Colonic Mucosa Colon
7 chr1:151909600-151917800 Weak transcription HUVEC blood vessel
8 chr1:151909800-151916400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr1:151911600-151916000 Enhancers Monocytes-CD14+_RO01746 blood
10 chr1:151912000-151917000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr1:151912200-151917800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr1:151912800-151915600 Enhancers Duodenum Smooth Muscle Duodenum
13 chr1:151913000-151917200 Enhancers Primary T helper 17 cells PMA-I stimulated --
14 chr1:151913000-151919800 Enhancers Fetal Intestine Large intestine
15 chr1:151913200-151915400 Enhancers Fetal Intestine Small intestine
16 chr1:151913200-151915600 Enhancers Duodenum Mucosa Duodenum
17 chr1:151913200-151916600 Enhancers Hela-S3 cervix
18 chr1:151913200-151916800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr1:151913200-151917800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
20 chr1:151913200-151919000 Enhancers Fetal Adrenal Gland Adrenal Gland
21 chr1:151913600-151915600 Enhancers Ovary ovary
22 chr1:151913800-151917000 Enhancers Adipose Nuclei Adipose
23 chr1:151914000-151916000 Weak transcription Left Ventricle heart
24 chr1:151914000-151916600 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr1:151914000-151917000 Weak transcription Esophagus oesophagus
26 chr1:151914000-151917000 Weak transcription Psoas Muscle Psoas
27 chr1:151914000-151917000 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr1:151914000-151917400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr1:151914000-151922000 Weak transcription Spleen Spleen
30 chr1:151914200-151915200 Weak transcription Fetal Heart heart
31 chr1:151914200-151915400 Weak transcription K562 blood
32 chr1:151914200-151915600 Weak transcription Primary B cells from peripheral blood blood
33 chr1:151914200-151916800 Weak transcription HSMM muscle
34 chr1:151914200-151917000 Weak transcription Pancreas Pancrea
35 chr1:151914200-151917400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr1:151914200-151917800 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr1:151914400-151915400 Weak transcription Fetal Kidney kidney
38 chr1:151914400-151915600 Weak transcription Stomach Smooth Muscle stomach
39 chr1:151914400-151916400 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr1:151914400-151916800 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr1:151914400-151917000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr1:151914400-151917200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
43 chr1:151914400-151917200 Weak transcription HSMMtube muscle
44 chr1:151914600-151916600 Weak transcription Primary monocytes fromperipheralblood blood
45 chr1:151914600-151916600 Weak transcription Primary T helper cells PMA-I stimulated --
46 chr1:151914600-151916600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr1:151914600-151916600 Weak transcription Fetal Muscle Leg muscle
48 chr1:151914600-151916800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr1:151914600-151917000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr1:151914600-151917400 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015