The 2.0 version of rSNPBase

Variant report

Variant rs58104135
Chromosome Location chr7:79787970-79787971
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:79776200-79796200 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr7:79777600-79791000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr7:79780400-79791400 Weak transcription Psoas Muscle Psoas
4 chr7:79780600-79788200 Weak transcription Ovary ovary
5 chr7:79781000-79788200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr7:79781200-79803200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr7:79781600-79789000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr7:79781600-79794200 Weak transcription Breast Myoepithelial Primary Cells Breast
9 chr7:79781600-79795200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr7:79781600-79797000 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr7:79783200-79794000 Weak transcription ES-I3 Cell Line embryonic stem cell
12 chr7:79783600-79788200 Weak transcription Gastric stomach
13 chr7:79783600-79789600 Weak transcription Left Ventricle heart
14 chr7:79783600-79791200 Weak transcription Primary hematopoietic stem cells blood
15 chr7:79783800-79788600 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr7:79783800-79806600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr7:79784000-79788000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr7:79784000-79792000 Weak transcription Fetal Kidney kidney
19 chr7:79784600-79790600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr7:79784800-79788800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr7:79784800-79791400 Enhancers Brain Substantia Nigra brain
22 chr7:79785200-79789600 Weak transcription Colon Smooth Muscle Colon
23 chr7:79785200-79791200 Weak transcription NHDF-Ad bronchial
24 chr7:79785400-79788600 Weak transcription Liver Liver
25 chr7:79785600-79794400 Weak transcription Rectal Smooth Muscle rectum
26 chr7:79786200-79788600 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr7:79786200-79791800 Weak transcription Fetal Brain Male brain
28 chr7:79786200-79794200 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr7:79786200-79796600 Weak transcription NHEK skin
30 chr7:79786200-79799600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr7:79786400-79788000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr7:79786400-79788200 Weak transcription Adipose Nuclei Adipose
33 chr7:79786400-79788400 Weak transcription Fetal Brain Female brain
34 chr7:79786400-79788800 Weak transcription A549 lung
35 chr7:79786400-79790600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr7:79786600-79788200 Weak transcription Brain Cingulate Gyrus brain
37 chr7:79786600-79789200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr7:79786800-79788800 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr7:79786800-79790000 Enhancers Brain Inferior Temporal Lobe brain
40 chr7:79787000-79788200 Weak transcription Brain Hippocampus Middle brain
41 chr7:79787400-79788600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr7:79787400-79788800 Enhancers Brain Anterior Caudate brain
43 chr7:79787600-79790600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr7:79787800-79788000 Enhancers H1 Cell Line embryonic stem cell
45 chr7:79787800-79788200 Weak transcription Fetal Lung lung
46 chr7:79787800-79788400 Enhancers Brain Angular Gyrus brain

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Last update: Aug 31, 2015