The 2.0 version of rSNPBase

Variant report

Variant rs58127062
Chromosome Location chr12:46918478-46918479
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:46910800-46920000 Enhancers Fetal Lung lung
2 chr12:46911600-46922800 Weak transcription Primary B cells from cord blood blood
3 chr12:46911800-46921800 Weak transcription Primary B cells from peripheral blood blood
4 chr12:46913600-46921400 Weak transcription GM12878-XiMat blood
5 chr12:46915800-46918800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr12:46916000-46919800 Enhancers Fetal Heart heart
7 chr12:46916200-46920400 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr12:46916400-46919400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr12:46916400-46921000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr12:46916600-46918800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
11 chr12:46916800-46919400 Enhancers Placenta Placenta
12 chr12:46916800-46920000 Enhancers Fetal Thymus thymus
13 chr12:46917000-46918600 Flanking Active TSS HepG2 liver
14 chr12:46917000-46919400 Enhancers Fetal Muscle Trunk muscle
15 chr12:46917000-46919600 Enhancers Fetal Stomach stomach
16 chr12:46917000-46920800 Enhancers Fetal Muscle Leg muscle
17 chr12:46917200-46918600 Flanking Active TSS A549 lung
18 chr12:46917200-46918600 Flanking Active TSS Dnd41 blood
19 chr12:46917200-46918600 Flanking Active TSS HSMM muscle
20 chr12:46917200-46918800 Flanking Active TSS Muscle Satellite Cultured Cells --
21 chr12:46917200-46918800 Enhancers Fetal Adrenal Gland Adrenal Gland
22 chr12:46917200-46919000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
23 chr12:46917200-46919000 Enhancers Sigmoid Colon Sigmoid Colon
24 chr12:46917200-46919200 Enhancers Fetal Intestine Large intestine
25 chr12:46917200-46919200 Enhancers Fetal Intestine Small intestine
26 chr12:46917200-46919400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr12:46917200-46919400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr12:46917200-46919400 Enhancers Right Atrium heart
29 chr12:46917200-46920000 Enhancers Left Ventricle heart
30 chr12:46917400-46918600 Flanking Active TSS NHDF-Ad bronchial
31 chr12:46917400-46918800 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr12:46917400-46918800 Enhancers HMEC breast
33 chr12:46917400-46919400 Enhancers Duodenum Smooth Muscle Duodenum
34 chr12:46917400-46919400 Enhancers Fetal Kidney kidney
35 chr12:46917400-46919600 Enhancers Skeletal Muscle Female skeletal muscle
36 chr12:46917400-46919800 Enhancers Rectal Smooth Muscle rectum
37 chr12:46917600-46918600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr12:46917600-46918600 Flanking Active TSS HSMMtube muscle
39 chr12:46917600-46918800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr12:46917800-46918600 Flanking Active TSS Stomach Smooth Muscle stomach
41 chr12:46917800-46919400 Enhancers Adipose Nuclei Adipose
42 chr12:46917800-46919600 Enhancers Placenta Amnion Placenta Amnion
43 chr12:46917800-46920000 Enhancers Skeletal Muscle Male skeletal muscle
44 chr12:46917800-46920400 Enhancers Ovary ovary
45 chr12:46918000-46918600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr12:46918000-46918600 Enhancers Esophagus oesophagus
47 chr12:46918000-46918800 Enhancers Primary T helper 17 cells PMA-I stimulated --
48 chr12:46918000-46918800 Enhancers Aorta Aorta
49 chr12:46918000-46918800 Enhancers NHEK skin
50 chr12:46918000-46919000 Enhancers Pancreas Pancrea

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Last update: Aug 31, 2015