Variant report
| Variant | rs58890669 |
|---|---|
| Chromosome Location | chr12:46855622-46855623 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:46828000-46856000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 2 | chr12:46844600-46866000 | Weak transcription | Fetal Intestine Large | intestine |
| 3 | chr12:46844600-46886000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 4 | chr12:46850000-46860200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 5 | chr12:46850400-46855800 | Weak transcription | Fetal Muscle Leg | muscle |
| 6 | chr12:46850400-46855800 | Weak transcription | HMEC | breast |
| 7 | chr12:46850600-46859200 | Weak transcription | Stomach Mucosa | stomach |
| 8 | chr12:46852400-46856200 | Enhancers | Muscle Satellite Cultured Cells | -- |
| 9 | chr12:46853200-46856000 | Enhancers | Ovary | ovary |
| 10 | chr12:46853200-46867400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 11 | chr12:46853600-46856400 | Weak transcription | NHLF | lung |
| 12 | chr12:46853600-46857600 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 13 | chr12:46853800-46857200 | Enhancers | Fetal Heart | heart |
| 14 | chr12:46853800-46857200 | Enhancers | Fetal Lung | lung |
| 15 | chr12:46853800-46858600 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 16 | chr12:46853800-46862600 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 17 | chr12:46854000-46856000 | Enhancers | Fetal Intestine Small | intestine |
| 18 | chr12:46854000-46857000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 19 | chr12:46854000-46857000 | Enhancers | Hela-S3 | cervix |
| 20 | chr12:46854000-46858400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 21 | chr12:46854200-46856200 | Enhancers | Sigmoid Colon | Sigmoid Colon |
| 22 | chr12:46854200-46856800 | Weak transcription | Fetal Stomach | stomach |
| 23 | chr12:46854200-46860800 | Weak transcription | HUVEC | blood vessel |
| 24 | chr12:46854400-46855800 | Enhancers | Primary T helper cells fromperipheralblood | blood |
| 25 | chr12:46854400-46856000 | Enhancers | Small Intestine | intestine |
| 26 | chr12:46854400-46856800 | Weak transcription | Thymus | Thymus |
| 27 | chr12:46854600-46856000 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 28 | chr12:46854600-46856200 | Enhancers | Psoas Muscle | Psoas |
| 29 | chr12:46854600-46856600 | Enhancers | Primary T cells from cord blood | blood |
| 30 | chr12:46854600-46856600 | Enhancers | Rectal Smooth Muscle | rectum |
| 31 | chr12:46854600-46857000 | Weak transcription | Brain Hippocampus Middle | brain |
| 32 | chr12:46854600-46857000 | Enhancers | NHDF-Ad | bronchial |
| 33 | chr12:46854600-46857200 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 34 | chr12:46854600-46857600 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 35 | chr12:46854600-46857600 | Enhancers | NHEK | skin |
| 36 | chr12:46854800-46856000 | Enhancers | A549 | lung |
| 37 | chr12:46854800-46856800 | Enhancers | Fetal Kidney | kidney |
| 38 | chr12:46854800-46856800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 39 | chr12:46854800-46856800 | Weak transcription | Right Atrium | heart |
| 40 | chr12:46854800-46859200 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 41 | chr12:46854800-46864000 | Weak transcription | Spleen | Spleen |
| 42 | chr12:46854800-46866000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 43 | chr12:46855000-46856600 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 44 | chr12:46855000-46857400 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 45 | chr12:46855000-46859200 | Weak transcription | Liver | Liver |
| 46 | chr12:46855000-46860200 | Weak transcription | GM12878-XiMat | blood |
| 47 | chr12:46855000-46863800 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 48 | chr12:46855200-46855800 | Enhancers | Colon Smooth Muscle | Colon |
| 49 | chr12:46855200-46856000 | Weak transcription | Left Ventricle | heart |
| 50 | chr12:46855200-46856000 | Enhancers | Right Ventricle | heart |
