The 2.0 version of rSNPBase

Variant report

Variant rs58134477
Chromosome Location chr21:17144842-17144843
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:17115400-17145400 Weak transcription Fetal Thymus thymus
2 chr21:17116600-17145400 Weak transcription Esophagus oesophagus
3 chr21:17125800-17153400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr21:17126800-17147600 Weak transcription Placenta Placenta
5 chr21:17127000-17147400 Weak transcription HSMMtube muscle
6 chr21:17127000-17152800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr21:17127200-17153400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr21:17127400-17146200 Weak transcription NHDF-Ad bronchial
9 chr21:17127400-17147800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr21:17127400-17153400 Weak transcription Brain Cingulate Gyrus brain
11 chr21:17127600-17145200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr21:17127800-17152800 Weak transcription Fetal Intestine Large intestine
13 chr21:17130800-17156800 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr21:17132800-17153400 Weak transcription Spleen Spleen
15 chr21:17133800-17145800 Weak transcription Colon Smooth Muscle Colon
16 chr21:17133800-17149400 Weak transcription Small Intestine intestine
17 chr21:17134000-17147600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr21:17134000-17152400 Weak transcription HUES6 Cell Line embryonic stem cell
19 chr21:17134000-17153400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr21:17134200-17153000 Weak transcription Fetal Muscle Trunk muscle
21 chr21:17134200-17153400 Weak transcription Stomach Smooth Muscle stomach
22 chr21:17134200-17154000 Weak transcription H9 Cell Line embryonic stem cell
23 chr21:17134400-17153200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr21:17135000-17145000 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr21:17135000-17152600 Weak transcription Primary T cells from cord blood blood
26 chr21:17135000-17153000 Weak transcription H1 Cell Line embryonic stem cell
27 chr21:17135000-17153400 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr21:17135000-17153600 Weak transcription Primary T killer memory cells from peripheral blood blood
29 chr21:17135200-17153000 Weak transcription Fetal Muscle Leg muscle
30 chr21:17135400-17153200 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr21:17135600-17153200 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr21:17135800-17147200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr21:17136000-17145400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr21:17136600-17148400 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr21:17136600-17153200 Weak transcription Thymus Thymus
36 chr21:17137600-17145400 Weak transcription Fetal Stomach stomach
37 chr21:17138600-17152800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr21:17139200-17146200 Weak transcription NHLF lung
39 chr21:17139600-17145200 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr21:17139600-17145400 Weak transcription Fetal Intestine Small intestine
41 chr21:17139600-17150800 Weak transcription Fetal Kidney kidney
42 chr21:17139800-17145400 Weak transcription Sigmoid Colon Sigmoid Colon
43 chr21:17139800-17149000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr21:17139800-17153000 Weak transcription Primary T regulatory cells fromperipheralblood blood
45 chr21:17139800-17153400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr21:17139800-17153400 Weak transcription Aorta Aorta
47 chr21:17140000-17145400 Weak transcription Rectal Smooth Muscle rectum
48 chr21:17140000-17146200 Weak transcription Muscle Satellite Cultured Cells --
49 chr21:17140000-17149000 Weak transcription Liver Liver
50 chr21:17140000-17152800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015