Variant report

Variant rs7277813
Chromosome Location chr21:17115749-17115750
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:17104200-17133400 Weak transcription Colonic Mucosa Colon
2 chr21:17104600-17123400 Weak transcription Brain Inferior Temporal Lobe brain
3 chr21:17105400-17119400 Weak transcription Brain Angular Gyrus brain
4 chr21:17105400-17125200 Weak transcription Brain Substantia Nigra brain
5 chr21:17106600-17116600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
6 chr21:17109400-17121000 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr21:17111600-17117800 Enhancers K562 blood
8 chr21:17112400-17116200 Weak transcription Primary T cells from cord blood blood
9 chr21:17112600-17118000 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr21:17112800-17123400 Weak transcription Brain Hippocampus Middle brain
11 chr21:17113400-17116200 Weak transcription H9 Cell Line embryonic stem cell
12 chr21:17113400-17116600 Enhancers Skeletal Muscle Female skeletal muscle
13 chr21:17113400-17118200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr21:17113400-17123600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr21:17113400-17124800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr21:17113600-17116400 Enhancers HUES6 Cell Line embryonic stem cell
17 chr21:17113600-17116600 Enhancers HepG2 liver
18 chr21:17114200-17121400 Weak transcription ES-I3 Cell Line embryonic stem cell
19 chr21:17114400-17115800 Enhancers H1 Cell Line embryonic stem cell
20 chr21:17114400-17115800 Enhancers Ovary ovary
21 chr21:17114400-17116400 ZNF genes & repeats GM12878-XiMat blood
22 chr21:17114400-17116600 ZNF genes & repeats Brain Germinal Matrix brain
23 chr21:17114400-17116600 Enhancers Gastric stomach
24 chr21:17114400-17117000 Enhancers Pancreas Pancrea
25 chr21:17114400-17121400 Weak transcription Muscle Satellite Cultured Cells --
26 chr21:17114600-17116600 Enhancers Right Ventricle heart
27 chr21:17114600-17116600 Enhancers Stomach Smooth Muscle stomach
28 chr21:17114600-17117400 Enhancers Left Ventricle heart
29 chr21:17114600-17121200 Weak transcription Rectal Smooth Muscle rectum
30 chr21:17114600-17123800 Weak transcription Brain Anterior Caudate brain
31 chr21:17114800-17115800 Genic enhancers Primary T cells fromperipheralblood blood
32 chr21:17114800-17115800 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
33 chr21:17114800-17115800 Strong transcription Fetal Intestine Large intestine
34 chr21:17114800-17115800 Genic enhancers Lung lung
35 chr21:17114800-17116000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
36 chr21:17114800-17116000 Weak transcription HMEC breast
37 chr21:17114800-17116200 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr21:17114800-17116400 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
39 chr21:17114800-17116600 Strong transcription Primary B cells from cord blood blood
40 chr21:17114800-17117200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr21:17114800-17119400 Weak transcription Primary T helper naive cells from peripheral blood blood
42 chr21:17114800-17120800 Weak transcription Primary hematopoietic stem cells blood
43 chr21:17114800-17121000 Weak transcription Duodenum Mucosa Duodenum
44 chr21:17114800-17121200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr21:17114800-17121200 Weak transcription Fetal Lung lung
46 chr21:17114800-17121200 Weak transcription Hela-S3 cervix
47 chr21:17114800-17121400 Weak transcription NHLF lung
48 chr21:17114800-17121800 Weak transcription Osteobl bone
49 chr21:17114800-17126600 Weak transcription Aorta Aorta
50 chr21:17114800-17126600 Weak transcription NH-A brain

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