Variant report

Variant	rs58142633
Chromosome Location	chr10:18357785-18357786
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11813889	0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11817171	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16916829	0.92[AFR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16916837	1.00[ASN][1000 genomes]
rs7067765	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7090868	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74118097	0.94[AFR][1000 genomes]
rs74118099	0.94[AFR][1000 genomes]
rs74118101	0.89[AFR][1000 genomes]
rs74120203	0.92[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74120207	0.82[AFR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18349200-18359200	Weak transcription	Stomach Smooth Muscle	stomach
2	chr10:18356400-18359400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr10:18356400-18359600	Weak transcription	NHEK	skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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