The 2.0 version of rSNPBase

Variant report

Variant rs58185502
Chromosome Location chr1:47111618-47111619
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:47083200-47115000 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:47083400-47113200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:47088200-47131600 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr1:47089800-47112400 Weak transcription Small Intestine intestine
5 chr1:47090200-47121400 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr1:47094600-47119200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr1:47098200-47113200 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr1:47098400-47112800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr1:47100000-47113400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr1:47101600-47130000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr1:47101600-47133000 Weak transcription H9 Cell Line embryonic stem cell
12 chr1:47101800-47112400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr1:47101800-47112600 Weak transcription Lung lung
14 chr1:47101800-47112800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr1:47101800-47113000 Weak transcription H1 Cell Line embryonic stem cell
16 chr1:47101800-47115000 Weak transcription Dnd41 blood
17 chr1:47101800-47115200 Weak transcription Gastric stomach
18 chr1:47101800-47119000 Weak transcription Colonic Mucosa Colon
19 chr1:47101800-47121200 Weak transcription HUVEC blood vessel
20 chr1:47102000-47115000 Weak transcription Primary T helper naive cells from peripheral blood blood
21 chr1:47102000-47122400 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr1:47102400-47121400 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr1:47103000-47112800 Weak transcription HUES6 Cell Line embryonic stem cell
24 chr1:47103000-47115200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr1:47103000-47115200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr1:47103000-47132800 Weak transcription Spleen Spleen
27 chr1:47103200-47113200 Weak transcription Fetal Brain Female brain
28 chr1:47105000-47132800 Weak transcription Stomach Mucosa stomach
29 chr1:47105600-47113800 Weak transcription Fetal Intestine Small intestine
30 chr1:47105800-47112600 Weak transcription NHEK skin
31 chr1:47105800-47115200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:47106800-47114600 Strong transcription Breast Myoepithelial Primary Cells Breast
33 chr1:47107000-47113800 Weak transcription Fetal Stomach stomach
34 chr1:47107000-47115200 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr1:47107400-47113600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr1:47107600-47112800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr1:47107800-47115200 Weak transcription Primary neutrophils fromperipheralblood blood
38 chr1:47108200-47112200 Weak transcription Liver Liver
39 chr1:47108200-47112800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
40 chr1:47108200-47113200 Enhancers Colon Smooth Muscle Colon
41 chr1:47108200-47123400 Weak transcription K562 blood
42 chr1:47108400-47112400 Weak transcription iPS-18 Cell Line embryonic stem cell
43 chr1:47108800-47115200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr1:47109000-47112600 Weak transcription Pancreatic Islets Pancreatic Islet
45 chr1:47109000-47113000 Weak transcription iPS-20b Cell Line embryonic stem cell
46 chr1:47109000-47115400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
47 chr1:47109200-47112200 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr1:47109200-47112600 Weak transcription Primary B cells from peripheral blood blood
49 chr1:47109200-47112600 Weak transcription Primary hematopoietic stem cells blood
50 chr1:47109200-47112600 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015