The 2.0 version of rSNPBase

Variant report

Variant rs58215017
Chromosome Location chr13:30850641-30850642
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:30805600-30853200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr13:30826800-30860400 Weak transcription Esophagus oesophagus
3 chr13:30828600-30857600 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr13:30832200-30855400 Weak transcription Fetal Brain Male brain
5 chr13:30832200-30861000 Weak transcription iPS-18 Cell Line embryonic stem cell
6 chr13:30832200-30863400 Weak transcription Stomach Smooth Muscle stomach
7 chr13:30832200-30863800 Weak transcription HSMMtube muscle
8 chr13:30832400-30859400 Weak transcription Brain Inferior Temporal Lobe brain
9 chr13:30834600-30853000 Weak transcription Primary T regulatory cells fromperipheralblood blood
10 chr13:30837200-30853000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr13:30837800-30860000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr13:30840400-30859800 Weak transcription H1 Cell Line embryonic stem cell
13 chr13:30841600-30853200 Weak transcription Adipose Nuclei Adipose
14 chr13:30842000-30853200 Weak transcription Fetal Kidney kidney
15 chr13:30842400-30853600 Weak transcription Colon Smooth Muscle Colon
16 chr13:30842400-30858200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr13:30842400-30863800 Weak transcription Ovary ovary
18 chr13:30842800-30853400 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr13:30843000-30851200 Weak transcription HUES64 Cell Line embryonic stem cell
20 chr13:30843000-30853400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr13:30843000-30857600 Weak transcription A549 lung
22 chr13:30843000-30880200 Weak transcription Fetal Stomach stomach
23 chr13:30843600-30855800 Weak transcription Primary neutrophils fromperipheralblood blood
24 chr13:30844000-30854800 Weak transcription iPS-15b Cell Line embryonic stem cell
25 chr13:30844800-30853200 Weak transcription HUES48 Cell Line embryonic stem cell
26 chr13:30845200-30866200 Weak transcription Small Intestine intestine
27 chr13:30845600-30853200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr13:30845600-30863400 Weak transcription K562 blood
29 chr13:30845800-30853000 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr13:30847000-30859800 Weak transcription Brain Germinal Matrix brain
31 chr13:30847200-30859400 Weak transcription Brain Anterior Caudate brain
32 chr13:30847200-30860400 Weak transcription Brain Substantia Nigra brain
33 chr13:30847200-30876000 Weak transcription Lung lung
34 chr13:30847400-30860800 Weak transcription Spleen Spleen
35 chr13:30847400-30867800 Weak transcription Right Ventricle heart
36 chr13:30847400-30870200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr13:30847600-30851200 Weak transcription HUVEC blood vessel
38 chr13:30847600-30857200 Weak transcription Primary monocytes fromperipheralblood blood
39 chr13:30848000-30862600 Weak transcription HepG2 liver
40 chr13:30848200-30853200 Weak transcription Left Ventricle heart
41 chr13:30848200-30857600 Weak transcription iPS-20b Cell Line embryonic stem cell
42 chr13:30848800-30851000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr13:30848800-30851000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr13:30848800-30853200 Weak transcription Fetal Adrenal Gland Adrenal Gland
45 chr13:30849000-30851600 Strong transcription Cortex derived primary cultured neurospheres brain
46 chr13:30849000-30853200 Weak transcription Liver Liver
47 chr13:30849000-30856000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr13:30849000-30862800 Weak transcription Fetal Heart heart
49 chr13:30849200-30851200 Strong transcription Fetal Brain Female brain
50 chr13:30849400-30859400 Weak transcription Aorta Aorta

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Last update: Aug 31, 2015