Variant report

Variant rs582680
Chromosome Location chr12:48039664-48039665
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:48007400-48041800 Weak transcription HSMMtube muscle
2 chr12:48007400-48044800 Weak transcription Aorta Aorta
3 chr12:48007400-48055400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr12:48015600-48055200 Weak transcription Placenta Amnion Placenta Amnion
5 chr12:48016000-48044400 Weak transcription NH-A brain
6 chr12:48023600-48044800 Weak transcription Gastric stomach
7 chr12:48029400-48055400 Weak transcription Thymus Thymus
8 chr12:48029800-48098800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr12:48030800-48042000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr12:48031000-48044600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr12:48031000-48083200 Weak transcription Esophagus oesophagus
12 chr12:48031200-48051400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr12:48031200-48053200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr12:48031400-48042000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr12:48031400-48042000 Weak transcription K562 blood
16 chr12:48031400-48044600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
17 chr12:48031400-48046200 Weak transcription Fetal Stomach stomach
18 chr12:48031400-48058400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr12:48031600-48044000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr12:48031600-48044600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr12:48032200-48045800 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr12:48035000-48044600 Weak transcription HSMM muscle
23 chr12:48036400-48044600 Weak transcription NHDF-Ad bronchial
24 chr12:48036600-48055400 Weak transcription Ovary ovary
25 chr12:48037400-48042200 Weak transcription Colon Smooth Muscle Colon
26 chr12:48037800-48040000 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr12:48038000-48042000 Weak transcription Placenta Placenta
28 chr12:48038000-48042200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr12:48038200-48039800 Weak transcription A549 lung
30 chr12:48038200-48044200 Weak transcription Osteobl bone
31 chr12:48038200-48059400 Weak transcription Small Intestine intestine
32 chr12:48038400-48044200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr12:48038600-48051400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr12:48038800-48042200 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr12:48038800-48044600 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr12:48038800-48045000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr12:48038800-48045800 Weak transcription Primary T cells from cord blood blood
38 chr12:48038800-48046000 Weak transcription Duodenum Smooth Muscle Duodenum
39 chr12:48039000-48040200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr12:48039000-48041600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr12:48039000-48044600 Weak transcription Primary B cells from peripheral blood blood
42 chr12:48039000-48052800 Weak transcription Dnd41 blood
43 chr12:48039200-48044600 Weak transcription Fetal Adrenal Gland Adrenal Gland
44 chr12:48039200-48044800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr12:48039200-48045000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
46 chr12:48039200-48046000 Weak transcription iPS-18 Cell Line embryonic stem cell
47 chr12:48039200-48046200 Weak transcription iPS-20b Cell Line embryonic stem cell
48 chr12:48039200-48052800 Weak transcription Fetal Intestine Large intestine
49 chr12:48039400-48040200 Strong transcription Primary B cells from cord blood blood
50 chr12:48039400-48040600 Strong transcription Breast Myoepithelial Primary Cells Breast

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