Variant report
| Variant | rs6580634 |
|---|---|
| Chromosome Location | chr12:48101230-48101231 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:48099200-48101800 | Active TSS | K562 | blood |
| 2 | chr12:48099400-48101400 | Active TSS | Colonic Mucosa | Colon |
| 3 | chr12:48099400-48101600 | Active TSS | Stomach Smooth Muscle | stomach |
| 4 | chr12:48099800-48101800 | Weak transcription | Spleen | Spleen |
| 5 | chr12:48100000-48101400 | Flanking Active TSS | Primary neutrophils fromperipheralblood | blood |
| 6 | chr12:48100000-48101400 | Flanking Active TSS | Primary B cells from cord blood | blood |
| 7 | chr12:48100000-48101400 | Flanking Active TSS | Primary hematopoietic stem cells | blood |
| 8 | chr12:48100000-48101400 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 9 | chr12:48100000-48102200 | Flanking Active TSS | Primary T cells from cord blood | blood |
| 10 | chr12:48100000-48102200 | Flanking Active TSS | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 11 | chr12:48100000-48102600 | Flanking Active TSS | Primary hematopoietic stem cells short term culture | blood |
| 12 | chr12:48100000-48109200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 13 | chr12:48100000-48111200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 14 | chr12:48100400-48102000 | Weak transcription | Gastric | stomach |
| 15 | chr12:48100400-48105400 | Weak transcription | Esophagus | oesophagus |
| 16 | chr12:48100600-48101400 | Flanking Active TSS | Primary T helper memory cells from peripheral blood 2 | blood |
| 17 | chr12:48100600-48101400 | Flanking Active TSS | Liver | Liver |
| 18 | chr12:48100600-48101600 | Flanking Active TSS | Dnd41 | blood |
| 19 | chr12:48100600-48102200 | Flanking Active TSS | Primary T helper naive cells fromperipheralblood | blood |
| 20 | chr12:48100600-48102200 | Flanking Active TSS | Primary T helper cells PMA-I stimulated | -- |
| 21 | chr12:48100600-48103600 | Weak transcription | Placenta | Placenta |
| 22 | chr12:48100600-48106200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 23 | chr12:48100600-48106800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 24 | chr12:48100600-48108800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 25 | chr12:48100600-48109000 | Weak transcription | Aorta | Aorta |
| 26 | chr12:48100600-48109000 | Weak transcription | Lung | lung |
| 27 | chr12:48100800-48101400 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 28 | chr12:48100800-48101400 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 29 | chr12:48100800-48101400 | Enhancers | Colon Smooth Muscle | Colon |
| 30 | chr12:48100800-48101400 | Active TSS | Rectal Mucosa Donor 31 | rectum |
| 31 | chr12:48100800-48101400 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 32 | chr12:48100800-48101400 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 33 | chr12:48100800-48101600 | Enhancers | HepG2 | liver |
| 34 | chr12:48100800-48101800 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 35 | chr12:48100800-48102200 | Enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
| 36 | chr12:48100800-48102200 | Enhancers | Pancreas | Pancrea |
| 37 | chr12:48100800-48103200 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 38 | chr12:48100800-48104800 | Flanking Active TSS | Monocytes-CD14+_RO01746 | blood |
| 39 | chr12:48100800-48106800 | Weak transcription | Fetal Stomach | stomach |
| 40 | chr12:48100800-48108800 | Weak transcription | Brain Hippocampus Middle | brain |
| 41 | chr12:48100800-48108800 | Weak transcription | Right Ventricle | heart |
| 42 | chr12:48100800-48109400 | Weak transcription | HSMM | muscle |
| 43 | chr12:48101000-48101400 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |
| 44 | chr12:48101000-48101400 | Enhancers | Adipose Nuclei | Adipose |
| 45 | chr12:48101000-48101400 | Enhancers | Brain Anterior Caudate | brain |
| 46 | chr12:48101000-48101400 | Enhancers | Psoas Muscle | Psoas |
| 47 | chr12:48101000-48101600 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 48 | chr12:48101000-48101600 | Enhancers | Hela-S3 | cervix |
| 49 | chr12:48101000-48101600 | Enhancers | NHLF | lung |
| 50 | chr12:48101000-48101800 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
