The 2.0 version of rSNPBase

Variant report

Variant rs582756
Chromosome Location chr6:113992674-113992675
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:113982400-113993600 Weak transcription Placenta Placenta
2 chr6:113983000-113993800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr6:113984200-113993200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr6:113984600-113993800 Weak transcription Duodenum Mucosa Duodenum
5 chr6:113989400-113993400 Enhancers GM12878-XiMat blood
6 chr6:113989400-113993600 Enhancers HepG2 liver
7 chr6:113990000-113993800 Weak transcription Fetal Kidney kidney
8 chr6:113990200-113995600 Enhancers Fetal Stomach stomach
9 chr6:113990400-113993600 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr6:113990400-113997200 Weak transcription Fetal Intestine Large intestine
11 chr6:113990600-113993800 Weak transcription Brain Hippocampus Middle brain
12 chr6:113990800-113993800 Weak transcription Stomach Mucosa stomach
13 chr6:113991000-113992800 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr6:113991000-113992800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr6:113991000-113993600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr6:113991000-113993800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr6:113991000-113993800 Weak transcription Rectal Smooth Muscle rectum
18 chr6:113991000-113994000 Weak transcription Pancreas Pancrea
19 chr6:113991000-113994000 Weak transcription A549 lung
20 chr6:113991200-113992800 Weak transcription HUES48 Cell Line embryonic stem cell
21 chr6:113991200-113992800 Weak transcription Adipose Nuclei Adipose
22 chr6:113991200-113993600 Weak transcription Ovary ovary
23 chr6:113991200-113993800 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr6:113991200-113993800 Weak transcription Psoas Muscle Psoas
25 chr6:113991200-113994000 Weak transcription Lung lung
26 chr6:113991200-113994000 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr6:113991200-113994000 Weak transcription Small Intestine intestine
28 chr6:113991400-113993800 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr6:113991800-113993600 Enhancers Fetal Muscle Leg muscle
30 chr6:113992000-113995800 Enhancers Cortex derived primary cultured neurospheres brain
31 chr6:113992200-113993600 Weak transcription Fetal Muscle Trunk muscle
32 chr6:113992400-113992800 Enhancers Primary B cells from peripheral blood blood
33 chr6:113992400-113993000 Enhancers Colon Smooth Muscle Colon
34 chr6:113992400-113993000 Enhancers Stomach Smooth Muscle stomach
35 chr6:113992400-113993200 Enhancers Primary hematopoietic stem cells blood
36 chr6:113992400-113993400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
37 chr6:113992400-113993600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr6:113992400-113993600 Enhancers NHLF lung
39 chr6:113992400-113994000 Enhancers Fetal Brain Male brain
40 chr6:113992400-113994200 Enhancers Primary hematopoietic stem cells short term culture blood
41 chr6:113992400-113994400 Enhancers Brain Germinal Matrix brain
42 chr6:113992400-113994400 Enhancers Monocytes-CD14+_RO01746 blood
43 chr6:113992400-113994600 Enhancers Primary monocytes fromperipheralblood blood
44 chr6:113992600-113992800 Enhancers ES-I3 Cell Line embryonic stem cell
45 chr6:113992600-113992800 Enhancers Liver Liver
46 chr6:113992600-113992800 Enhancers Fetal Intestine Small intestine
47 chr6:113992600-113992800 Flanking Active TSS Fetal Lung lung
48 chr6:113992600-113993000 Enhancers Duodenum Smooth Muscle Duodenum
49 chr6:113992600-113993000 Enhancers Osteobl bone
50 chr6:113992600-113993200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015