Variant report

Variant rs422286
Chromosome Location chr6:113950474-113950475
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:113933000-113952000 Weak transcription Psoas Muscle Psoas
2 chr6:113941800-113951000 Weak transcription Stomach Smooth Muscle stomach
3 chr6:113942200-113950600 Weak transcription Rectal Smooth Muscle rectum
4 chr6:113942200-113951000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr6:113942200-113952200 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr6:113942400-113952800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr6:113943000-113956400 Weak transcription Esophagus oesophagus
8 chr6:113944200-113951200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr6:113945400-113951200 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr6:113945600-113952000 Weak transcription Fetal Intestine Small intestine
11 chr6:113946600-113956000 Flanking Active TSS GM12878-XiMat blood
12 chr6:113946800-113952000 Enhancers Primary B cells from peripheral blood blood
13 chr6:113947200-113951000 Weak transcription Stomach Mucosa stomach
14 chr6:113948200-113951800 Weak transcription HepG2 liver
15 chr6:113948200-113952200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr6:113948200-113952200 Weak transcription Duodenum Mucosa Duodenum
17 chr6:113948400-113951200 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr6:113948400-113953400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr6:113949400-113950600 Enhancers Fetal Thymus thymus
20 chr6:113949600-113950600 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr6:113950000-113952000 Enhancers Primary monocytes fromperipheralblood blood
22 chr6:113950000-113954400 Enhancers Fetal Muscle Leg muscle
23 chr6:113950200-113950600 Enhancers Fetal Heart heart
24 chr6:113950200-113950600 Flanking Active TSS Skeletal Muscle Male skeletal muscle
25 chr6:113950200-113950800 Enhancers Skeletal Muscle Female skeletal muscle
26 chr6:113950200-113952000 Enhancers Primary neutrophils fromperipheralblood blood
27 chr6:113950200-113952000 Enhancers Primary B cells from cord blood blood
28 chr6:113950200-113952000 Enhancers Monocytes-CD14+_RO01746 blood
29 chr6:113950200-113952200 Enhancers Rectal Mucosa Donor 29 rectum
30 chr6:113950200-113954400 Enhancers Primary hematopoietic stem cells short term culture blood
31 chr6:113950400-113950600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr6:113950400-113950600 Enhancers Spleen Spleen
33 chr6:113950400-113950600 Enhancers HSMMtube muscle
34 chr6:113950400-113952200 Weak transcription Aorta Aorta
35 chr6:113950400-113952200 Weak transcription Left Ventricle heart
36 chr6:113950400-113952200 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr6:113950400-113953400 Enhancers Adipose Nuclei Adipose
38 chr6:113950400-113953400 Weak transcription Sigmoid Colon Sigmoid Colon

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