The 2.0 version of rSNPBase

Variant report

Variant rs58307002
Chromosome Location chr2:187534115-187534116
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:187456800-187534400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr2:187464800-187536200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr2:187476800-187536200 Weak transcription Fetal Brain Male brain
4 chr2:187489400-187534400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr2:187494200-187535800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr2:187495000-187534400 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr2:187501000-187548400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chr2:187503400-187545000 Weak transcription Hela-S3 cervix
9 chr2:187506600-187537000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr2:187507800-187546600 Weak transcription Small Intestine intestine
11 chr2:187510800-187535000 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr2:187511200-187536200 Strong transcription HUES64 Cell Line embryonic stem cell
13 chr2:187511400-187546600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr2:187511600-187545000 Strong transcription Osteobl bone
15 chr2:187513800-187546800 Strong transcription NH-A brain
16 chr2:187514600-187546200 Strong transcription Placenta Placenta
17 chr2:187515200-187536200 Weak transcription Primary B cells from cord blood blood
18 chr2:187516400-187543600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr2:187516600-187535000 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr2:187516600-187545400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
21 chr2:187518800-187547200 Strong transcription HUVEC blood vessel
22 chr2:187520000-187545000 Weak transcription ES-WA7 Cell Line embryonic stem cell
23 chr2:187520200-187537000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr2:187523000-187546800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr2:187523200-187535800 Weak transcription Primary T killer naive cells fromperipheralblood blood
26 chr2:187523400-187537200 Strong transcription Fetal Intestine Large intestine
27 chr2:187525000-187543200 Weak transcription Thymus Thymus
28 chr2:187525400-187535000 Strong transcription Fetal Adrenal Gland Adrenal Gland
29 chr2:187525400-187541800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr2:187526600-187537200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr2:187527600-187537000 Strong transcription Rectal Mucosa Donor 29 rectum
32 chr2:187527600-187537400 Strong transcription HepG2 liver
33 chr2:187527600-187543600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr2:187527600-187546400 Strong transcription Monocytes-CD14+_RO01746 blood
35 chr2:187527800-187536000 Strong transcription Breast Myoepithelial Primary Cells Breast
36 chr2:187527800-187536400 Strong transcription A549 lung
37 chr2:187527800-187536800 Strong transcription Primary hematopoietic stem cells blood
38 chr2:187527800-187537000 Strong transcription Adipose Nuclei Adipose
39 chr2:187527800-187537200 Strong transcription Primary hematopoietic stem cells short term culture blood
40 chr2:187527800-187542000 Strong transcription Skeletal Muscle Male skeletal muscle
41 chr2:187527800-187542000 Strong transcription HMEC breast
42 chr2:187527800-187544200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
43 chr2:187528000-187536400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr2:187528000-187543200 Strong transcription Duodenum Smooth Muscle Duodenum
45 chr2:187528000-187544000 Strong transcription Primary monocytes fromperipheralblood blood
46 chr2:187528000-187544600 Strong transcription HSMM muscle
47 chr2:187528000-187548000 Weak transcription iPS-15b Cell Line embryonic stem cell
48 chr2:187528200-187534800 Weak transcription Primary B cells from peripheral blood blood
49 chr2:187528200-187537000 Strong transcription Cortex derived primary cultured neurospheres brain
50 chr2:187528200-187543600 Strong transcription HUES6 Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015