The 2.0 version of rSNPBase

Variant report

Variant rs58309379
Chromosome Location chr12:51487751-51487752
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:51477400-51488200 Weak transcription Spleen Spleen
2 chr12:51477400-51488800 Weak transcription Gastric stomach
3 chr12:51477400-51490000 Weak transcription Small Intestine intestine
4 chr12:51477400-51518200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr12:51477600-51487800 Weak transcription Placenta Amnion Placenta Amnion
6 chr12:51477800-51487800 Weak transcription Liver Liver
7 chr12:51477800-51487800 Weak transcription Brain Cingulate Gyrus brain
8 chr12:51477800-51487800 Weak transcription Colon Smooth Muscle Colon
9 chr12:51477800-51487800 Weak transcription Left Ventricle heart
10 chr12:51477800-51487800 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr12:51477800-51487800 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr12:51477800-51487800 Weak transcription Hela-S3 cervix
13 chr12:51477800-51487800 Weak transcription NH-A brain
14 chr12:51477800-51487800 Weak transcription NHDF-Ad bronchial
15 chr12:51477800-51488000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr12:51477800-51488000 Weak transcription H9 Cell Line embryonic stem cell
17 chr12:51477800-51488000 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr12:51477800-51488000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr12:51477800-51488000 Weak transcription Primary T helper naive cells fromperipheralblood blood
20 chr12:51477800-51488000 Weak transcription Brain Angular Gyrus brain
21 chr12:51477800-51488000 Weak transcription Fetal Heart heart
22 chr12:51477800-51488000 Weak transcription Fetal Kidney kidney
23 chr12:51477800-51488000 Weak transcription Stomach Smooth Muscle stomach
24 chr12:51477800-51488000 Weak transcription Thymus Thymus
25 chr12:51477800-51488000 Weak transcription HUVEC blood vessel
26 chr12:51477800-51488000 Weak transcription NHEK skin
27 chr12:51477800-51488200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr12:51477800-51488200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr12:51477800-51488200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr12:51477800-51488200 Weak transcription Ovary ovary
31 chr12:51477800-51488200 Weak transcription Right Ventricle heart
32 chr12:51477800-51488400 Weak transcription Rectal Smooth Muscle rectum
33 chr12:51477800-51488600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
34 chr12:51477800-51488800 Weak transcription Pancreatic Islets Pancreatic Islet
35 chr12:51477800-51490000 Weak transcription Aorta Aorta
36 chr12:51477800-51492600 Weak transcription Esophagus oesophagus
37 chr12:51477800-51499600 Weak transcription NHLF lung
38 chr12:51477800-51518400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
39 chr12:51477800-51518400 Weak transcription Pancreas Pancrea
40 chr12:51477800-51550200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr12:51478000-51487800 Weak transcription Primary B cells from cord blood blood
42 chr12:51478000-51487800 Weak transcription Primary T helper cells PMA-I stimulated --
43 chr12:51478000-51488000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr12:51478000-51488000 Weak transcription Primary T killer naive cells fromperipheralblood blood
45 chr12:51478000-51488000 Weak transcription Brain Hippocampus Middle brain
46 chr12:51478000-51488000 Weak transcription Fetal Intestine Large intestine
47 chr12:51478000-51488000 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr12:51478000-51488200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr12:51478000-51496000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr12:51478200-51487800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015