The 2.0 version of rSNPBase

Variant report

Variant rs7977993
Chromosome Location chr12:51480031-51480032
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:51477400-51488200 Weak transcription Spleen Spleen
2 chr12:51477400-51488800 Weak transcription Gastric stomach
3 chr12:51477400-51490000 Weak transcription Small Intestine intestine
4 chr12:51477400-51518200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr12:51477600-51487800 Weak transcription Placenta Amnion Placenta Amnion
6 chr12:51477800-51481200 Weak transcription GM12878-XiMat blood
7 chr12:51477800-51482600 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr12:51477800-51482600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr12:51477800-51482600 Weak transcription Brain Germinal Matrix brain
10 chr12:51477800-51482600 Weak transcription Brain Inferior Temporal Lobe brain
11 chr12:51477800-51482600 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr12:51477800-51482800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr12:51477800-51482800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr12:51477800-51482800 Weak transcription Muscle Satellite Cultured Cells --
15 chr12:51477800-51482800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr12:51477800-51482800 Weak transcription Fetal Brain Female brain
17 chr12:51477800-51483200 Weak transcription Fetal Intestine Small intestine
18 chr12:51477800-51483800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr12:51477800-51484000 Weak transcription HSMM muscle
20 chr12:51477800-51484000 Weak transcription HSMMtube muscle
21 chr12:51477800-51484800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
22 chr12:51477800-51484800 Weak transcription Brain Anterior Caudate brain
23 chr12:51477800-51484800 Weak transcription Fetal Lung lung
24 chr12:51477800-51484800 Weak transcription Osteobl bone
25 chr12:51477800-51485000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr12:51477800-51485000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr12:51477800-51485000 Weak transcription Duodenum Mucosa Duodenum
28 chr12:51477800-51485200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr12:51477800-51485400 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr12:51477800-51485800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr12:51477800-51485800 Weak transcription A549 lung
32 chr12:51477800-51486000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr12:51477800-51486000 Weak transcription Lung lung
34 chr12:51477800-51486800 Weak transcription H1 Cell Line embryonic stem cell
35 chr12:51477800-51487000 Weak transcription HUES6 Cell Line embryonic stem cell
36 chr12:51477800-51487000 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr12:51477800-51487000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr12:51477800-51487000 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr12:51477800-51487200 Weak transcription HUES64 Cell Line embryonic stem cell
40 chr12:51477800-51487200 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr12:51477800-51487400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr12:51477800-51487400 Weak transcription iPS-20b Cell Line embryonic stem cell
43 chr12:51477800-51487400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr12:51477800-51487400 Weak transcription Primary T killer memory cells from peripheral blood blood
45 chr12:51477800-51487400 Weak transcription HMEC breast
46 chr12:51477800-51487600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr12:51477800-51487600 Weak transcription Primary T cells from cord blood blood
48 chr12:51477800-51487600 Weak transcription Adipose Nuclei Adipose
49 chr12:51477800-51487600 Weak transcription Brain Substantia Nigra brain
50 chr12:51477800-51487600 Weak transcription Rectal Mucosa Donor 29 rectum

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Last update: Aug 31, 2015