Variant report

Variant rs58397190
Chromosome Location chr1:77954409-77954410
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:25 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:77913200-77968400 Weak transcription Primary T helper cells fromperipheralblood blood
2 chr1:77914600-77955600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr1:77934600-77955200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr1:77935600-77955800 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr1:77935800-77954800 Weak transcription Brain Cingulate Gyrus brain
6 chr1:77940200-77955800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:77940400-77954800 Weak transcription Brain Angular Gyrus brain
8 chr1:77940400-77955400 Weak transcription NHLF lung
9 chr1:77940600-77954800 Weak transcription Brain Hippocampus Middle brain
10 chr1:77940600-77955600 Weak transcription Primary T helper naive cells from peripheral blood blood
11 chr1:77940600-77960800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr1:77940800-77955400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr1:77944800-77955400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr1:77945400-77958600 Weak transcription Primary T cells from cord blood blood
15 chr1:77945800-77961600 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr1:77947000-77954800 Weak transcription Brain Substantia Nigra brain
17 chr1:77953400-77955600 Strong transcription Muscle Satellite Cultured Cells --
18 chr1:77953600-77954600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr1:77953600-77954800 Weak transcription NHDF-Ad bronchial
20 chr1:77954200-77955400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr1:77954200-77955400 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
22 chr1:77954200-77956800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
23 chr1:77954400-77955800 Enhancers Brain Inferior Temporal Lobe brain
24 chr1:77954400-77955800 Enhancers HSMM muscle
25 chr1:77954400-77956200 Enhancers HSMMtube muscle

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