Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:58073979..58075623-chr15:58081038..58083837,2	K562	blood:

rSNPs within LD-proxies of this variant (count:3)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530682	chr15:57912502-58108285	Weak transcription Flanking Active TSS Strong transcription Active TSS Enhancers Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv1038667	chr15:57933076-58481870	Flanking Active TSS Enhancers Genic enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
3	nsv542400	chr15:57933076-58481870	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:58069000-58076000	Weak transcription	Fetal Lung	lung
2	chr15:58070200-58075200	Weak transcription	Lung	lung
3	chr15:58071800-58075200	Weak transcription	HMEC	breast
4	chr15:58071800-58077200	Enhancers	NHDF-Ad	bronchial
5	chr15:58072000-58075000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr15:58072600-58076200	Weak transcription	Fetal Intestine Large	intestine
7	chr15:58073000-58074600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr15:58073200-58074800	Flanking Active TSS	Thymus	Thymus
9	chr15:58073400-58074600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr15:58073600-58076200	Weak transcription	Fetal Muscle Trunk	muscle
11	chr15:58074000-58074800	Enhancers	Fetal Heart	heart
12	chr15:58074000-58075200	Weak transcription	Fetal Muscle Leg	muscle
13	chr15:58074000-58075200	Weak transcription	Right Ventricle	heart
14	chr15:58074000-58076000	Enhancers	Fetal Thymus	thymus
15	chr15:58074000-58076200	Enhancers	NHEK	skin
16	chr15:58074000-58076400	Weak transcription	Brain Angular Gyrus	brain
17	chr15:58074200-58075200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
18	chr15:58074400-58074800	Weak transcription	Right Atrium	heart
19	chr15:58074400-58076000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr15:58074400-58076600	Weak transcription	Primary T cells from cord blood	blood

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