Variant report

Variant rs58418761
Chromosome Location chr13:40145808-40145809
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:40129000-40152800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr13:40138800-40152800 Weak transcription Aorta Aorta
3 chr13:40139200-40158000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr13:40139800-40146400 Weak transcription Brain Substantia Nigra brain
5 chr13:40140000-40169400 Weak transcription Fetal Stomach stomach
6 chr13:40140200-40149600 Weak transcription Fetal Muscle Leg muscle
7 chr13:40140400-40157800 Weak transcription Adipose Nuclei Adipose
8 chr13:40140600-40146600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr13:40140600-40148600 Weak transcription Fetal Lung lung
10 chr13:40140800-40152800 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr13:40140800-40165400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr13:40142000-40148800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr13:40142000-40156200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr13:40142000-40156200 Weak transcription Placenta Amnion Placenta Amnion
15 chr13:40142000-40169400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr13:40142000-40169400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr13:40142200-40150000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr13:40142200-40152600 Weak transcription HUES6 Cell Line embryonic stem cell
19 chr13:40143000-40149400 Weak transcription Muscle Satellite Cultured Cells --
20 chr13:40143000-40158200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr13:40143200-40157800 Weak transcription NHDF-Ad bronchial
22 chr13:40143200-40161800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr13:40143200-40170800 Weak transcription Osteobl bone
24 chr13:40144400-40147200 Enhancers Fetal Heart heart
25 chr13:40144800-40146400 Enhancers Left Ventricle heart
26 chr13:40145400-40146200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
27 chr13:40145400-40146400 Enhancers Right Atrium heart
28 chr13:40145600-40146000 Enhancers H1 Cell Line embryonic stem cell
29 chr13:40145600-40146000 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
30 chr13:40145600-40146000 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin01 Skin
31 chr13:40145600-40146000 Enhancers Spleen Spleen
32 chr13:40145600-40146000 Enhancers NHLF lung
33 chr13:40145600-40146200 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr13:40145600-40146200 Enhancers Fetal Muscle Trunk muscle
35 chr13:40145600-40146200 Enhancers Lung lung
36 chr13:40145600-40146800 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr13:40145600-40153200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr13:40145800-40146000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr13:40145800-40146000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
40 chr13:40145800-40146200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
41 chr13:40145800-40146200 Enhancers Ovary ovary
42 chr13:40145800-40146200 Flanking Active TSS Right Ventricle heart
43 chr13:40145800-40146400 ZNF genes & repeats Ganglion Eminence derived primary cultured neurospheres brain

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