The 2.0 version of rSNPBase

Variant report

Variant rs58423891
Chromosome Location chr6:30499239-30499240
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30486000-30500000 Weak transcription Thymus Thymus
2 chr6:30495000-30501200 Enhancers Primary B cells from cord blood blood
3 chr6:30496000-30500000 Weak transcription Right Atrium heart
4 chr6:30496200-30500000 Weak transcription Colon Smooth Muscle Colon
5 chr6:30496200-30500000 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr6:30496400-30500000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr6:30496400-30500000 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr6:30496400-30500000 Weak transcription Stomach Mucosa stomach
9 chr6:30496400-30500200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr6:30496400-30500200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
11 chr6:30496400-30500200 Weak transcription NHEK skin
12 chr6:30496400-30500200 Weak transcription Osteobl bone
13 chr6:30496400-30500400 Weak transcription NHLF lung
14 chr6:30496400-30513400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr6:30497000-30500400 Weak transcription NHDF-Ad bronchial
16 chr6:30497600-30500400 Enhancers GM12878-XiMat blood
17 chr6:30497600-30513400 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr6:30497800-30500000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr6:30498000-30500000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr6:30498200-30499600 Weak transcription Primary T helper cells fromperipheralblood blood
21 chr6:30498200-30499600 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr6:30498200-30500200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr6:30498200-30500200 Enhancers Primary T helper cells PMA-I stimulated --
24 chr6:30498200-30500200 Weak transcription Duodenum Mucosa Duodenum
25 chr6:30498200-30500200 Weak transcription HUVEC blood vessel
26 chr6:30498200-30500400 Weak transcription Liver Liver
27 chr6:30498400-30499600 Weak transcription Primary T cells from cord blood blood
28 chr6:30498400-30499600 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr6:30498400-30499600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr6:30498400-30500000 Weak transcription Adipose Nuclei Adipose
31 chr6:30498400-30500000 Weak transcription Fetal Thymus thymus
32 chr6:30498400-30500400 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr6:30498400-30501400 Weak transcription Fetal Intestine Large intestine
34 chr6:30498600-30499600 Weak transcription Primary hematopoietic stem cells blood
35 chr6:30498600-30499600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr6:30498600-30499800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
37 chr6:30498600-30500000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr6:30498600-30500200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr6:30498600-30500200 Weak transcription Lung lung
40 chr6:30498600-30500200 Weak transcription K562 blood
41 chr6:30498600-30501400 Weak transcription Fetal Adrenal Gland Adrenal Gland
42 chr6:30498800-30499800 Weak transcription Primary T cells fromperipheralblood blood
43 chr6:30498800-30499800 Weak transcription Primary T helper naive cells from peripheral blood blood
44 chr6:30498800-30499800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr6:30498800-30500000 Weak transcription HepG2 liver
46 chr6:30498800-30501200 Enhancers Primary neutrophils fromperipheralblood blood
47 chr6:30499000-30499400 Weak transcription Primary B cells from peripheral blood blood
48 chr6:30499000-30499400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
49 chr6:30499000-30499400 Weak transcription Primary T regulatory cells fromperipheralblood blood
50 chr6:30499000-30499400 Weak transcription Primary T killer memory cells from peripheral blood blood

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Last update: Aug 31, 2015