Variant report

Variant	rs58429332
Chromosome Location	chr4:26375604-26375605
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr4:26373741..26376341-chr4:26381359..26383969,2	K562	blood:
2	chr4:26374599..26376344-chr4:26379092..26381336,3	K562	blood:
3	chr4:26370806..26373086-chr4:26374915..26376898,2	K562	blood:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs10009355	0.81[EUR][1000 genomes]
rs12651502	0.90[EUR][1000 genomes]
rs2077777	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs34295457	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs60115690	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs60730169	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6847065	0.85[EUR][1000 genomes];0.83[ASN][1000 genomes]

No data

Chromatin state (count:111 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:26358000-26387600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr4:26358000-26390600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr4:26361400-26376600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr4:26369200-26389000	Weak transcription	Fetal Muscle Trunk	muscle
5	chr4:26371600-26389200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr4:26371600-26408200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr4:26371800-26378800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr4:26371800-26387600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr4:26373200-26388600	Enhancers	Primary neutrophils fromperipheralblood	blood
10	chr4:26373400-26376600	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
11	chr4:26373600-26376000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
12	chr4:26373800-26376000	Enhancers	Primary T regulatory cells fromperipheralblood	blood
13	chr4:26373800-26376200	Enhancers	Primary T killer memory cells from peripheral blood	blood
14	chr4:26373800-26376600	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
15	chr4:26373800-26380400	Enhancers	Brain Cingulate Gyrus	brain
16	chr4:26374000-26375800	Enhancers	Primary T cells from cord blood	blood
17	chr4:26374000-26375800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr4:26374000-26376400	Enhancers	Primary T helper cells PMA-I stimulated	--
19	chr4:26374200-26375800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr4:26374200-26375800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
21	chr4:26374200-26376000	Enhancers	Primary T helper naive cells from peripheral blood	blood
22	chr4:26374400-26376200	Enhancers	Primary T cells fromperipheralblood	blood
23	chr4:26374400-26376600	Weak transcription	H1 Cell Line	embryonic stem cell
24	chr4:26374400-26378200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
25	chr4:26374400-26388600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
26	chr4:26374600-26376000	Weak transcription	Placenta	Placenta
27	chr4:26374600-26376200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
28	chr4:26374600-26376200	Weak transcription	Lung	lung
29	chr4:26374600-26376600	Weak transcription	HUES6 Cell Line	embryonic stem cell
30	chr4:26374600-26376800	Weak transcription	Fetal Muscle Leg	muscle
31	chr4:26374600-26377000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
32	chr4:26374600-26377200	Weak transcription	Psoas Muscle	Psoas
33	chr4:26374600-26379000	Weak transcription	Fetal Kidney	kidney
34	chr4:26374600-26379600	Weak transcription	Gastric	stomach
35	chr4:26374600-26380800	Weak transcription	Spleen	Spleen
36	chr4:26374600-26381000	Weak transcription	Sigmoid Colon	Sigmoid Colon
37	chr4:26374600-26387800	Weak transcription	Right Atrium	heart
38	chr4:26374600-26389200	Weak transcription	Fetal Intestine Large	intestine
39	chr4:26374600-26389200	Weak transcription	Left Ventricle	heart
40	chr4:26374600-26390000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
41	chr4:26374600-26390400	Weak transcription	Fetal Intestine Small	intestine
42	chr4:26374600-26390400	Weak transcription	Thymus	Thymus
43	chr4:26374600-26390600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
44	chr4:26374600-26390600	Weak transcription	Pancreas	Pancrea
45	chr4:26374600-26396800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
46	chr4:26374600-26404200	Weak transcription	Right Ventricle	heart
47	chr4:26374800-26377800	Weak transcription	Cortex derived primary cultured neurospheres	brain
48	chr4:26374800-26378800	Weak transcription	Pancreatic Islets	Pancreatic Islet
49	chr4:26374800-26387000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
50	chr4:26374800-26388200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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