Variant report
| Variant | rs58551379 |
|---|---|
| Chromosome Location | chr3:46654054-46654055 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:46650800-46654600 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 2 | chr3:46651400-46654200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 3 | chr3:46651400-46655000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 4 | chr3:46651400-46655400 | Enhancers | Fetal Muscle Leg | muscle |
| 5 | chr3:46651600-46655000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 6 | chr3:46651600-46671200 | Weak transcription | Right Atrium | heart |
| 7 | chr3:46651800-46658000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 8 | chr3:46652000-46654400 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 9 | chr3:46652000-46655200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 10 | chr3:46652000-46661000 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 11 | chr3:46652000-46661200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 12 | chr3:46652600-46654600 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 13 | chr3:46653400-46654200 | Enhancers | Liver | Liver |
| 14 | chr3:46653400-46654200 | Enhancers | Fetal Brain Male | brain |
| 15 | chr3:46653400-46654400 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 16 | chr3:46653400-46654400 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 17 | chr3:46653400-46654400 | Enhancers | Brain Substantia Nigra | brain |
| 18 | chr3:46653400-46654400 | Enhancers | Fetal Brain Female | brain |
| 19 | chr3:46653400-46654600 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 20 | chr3:46653400-46654600 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 21 | chr3:46653400-46654600 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
| 22 | chr3:46653400-46654600 | Enhancers | Brain Germinal Matrix | brain |
| 23 | chr3:46653600-46654200 | Enhancers | Fetal Kidney | kidney |
| 24 | chr3:46653600-46654200 | Enhancers | Fetal Lung | lung |
| 25 | chr3:46653600-46654200 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 26 | chr3:46653600-46654400 | Enhancers | Adipose Nuclei | Adipose |
| 27 | chr3:46653600-46654400 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 28 | chr3:46653600-46654600 | Enhancers | Brain Angular Gyrus | brain |
| 29 | chr3:46653800-46654200 | Enhancers | iPS DF 6.9 Cell Line | embryonic stem cell |
| 30 | chr3:46653800-46654200 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 31 | chr3:46653800-46654400 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 32 | chr3:46653800-46654400 | Flanking Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 33 | chr3:46653800-46655000 | Weak transcription | Fetal Thymus | thymus |
| 34 | chr3:46654000-46654200 | Flanking Bivalent TSS/Enh | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 35 | chr3:46654000-46654200 | Flanking Active TSS | Brain Hippocampus Middle | brain |
| 36 | chr3:46654000-46654400 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 37 | chr3:46654000-46654400 | Enhancers | HUES64 Cell Line | embryonic stem cell |
| 38 | chr3:46654000-46654400 | Flanking Active TSS | Brain Anterior Caudate | brain |
| 39 | chr3:46654000-46654400 | Flanking Active TSS | Brain Cingulate Gyrus | brain |
