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Variant report

Variant rs58556553
Chromosome Location chr13:111056667-111056668
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:111040800-111058000 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr13:111041400-111058000 Weak transcription Fetal Intestine Large intestine
3 chr13:111043000-111057000 Weak transcription NHEK skin
4 chr13:111043000-111059200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr13:111043000-111060000 Weak transcription A549 lung
6 chr13:111045200-111056800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr13:111045600-111058200 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr13:111045600-111059400 Weak transcription HUES64 Cell Line embryonic stem cell
9 chr13:111049000-111059600 Weak transcription HUES6 Cell Line embryonic stem cell
10 chr13:111050200-111064400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr13:111050200-111066000 Enhancers NHDF-Ad bronchial
12 chr13:111050200-111075200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr13:111050400-111057200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr13:111050400-111060400 Enhancers HSMMtube muscle
15 chr13:111050800-111059600 Enhancers Muscle Satellite Cultured Cells --
16 chr13:111051400-111059400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
17 chr13:111051600-111060000 Weak transcription Gastric stomach
18 chr13:111051800-111059600 Weak transcription Aorta Aorta
19 chr13:111052000-111059600 Weak transcription Brain Hippocampus Middle brain
20 chr13:111052200-111057800 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr13:111052200-111058000 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr13:111052200-111059400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr13:111052200-111063400 Weak transcription Psoas Muscle Psoas
24 chr13:111052600-111056800 Weak transcription Rectal Smooth Muscle rectum
25 chr13:111053000-111063600 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr13:111053600-111058000 Weak transcription Fetal Kidney kidney
27 chr13:111053600-111058200 Weak transcription Fetal Lung lung
28 chr13:111053800-111057000 Weak transcription Adipose Nuclei Adipose
29 chr13:111054000-111057000 Weak transcription Fetal Heart heart
30 chr13:111054200-111056800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr13:111054200-111057000 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
32 chr13:111054200-111057000 Genic enhancers Osteobl bone
33 chr13:111054600-111058600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr13:111054600-111061200 Enhancers NH-A brain
35 chr13:111054800-111057800 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr13:111054800-111060200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
37 chr13:111054800-111060400 Enhancers NHLF lung
38 chr13:111055000-111057400 Genic enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr13:111055000-111058600 Enhancers Breast Myoepithelial Primary Cells Breast
40 chr13:111055200-111059600 Weak transcription Ovary ovary
41 chr13:111055400-111056800 Weak transcription Esophagus oesophagus
42 chr13:111055400-111056800 Strong transcription Fetal Muscle Trunk muscle
43 chr13:111055400-111057400 Enhancers HMEC breast
44 chr13:111055400-111057800 Weak transcription Right Ventricle heart
45 chr13:111055400-111059400 Weak transcription Spleen Spleen
46 chr13:111055400-111059600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr13:111055400-111059800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
48 chr13:111055600-111058000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr13:111055600-111058200 Weak transcription Fetal Intestine Small intestine
50 chr13:111056000-111057800 Weak transcription Right Atrium heart

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Last update: Aug 31, 2015