Variant report

Variant	rs58664527
Chromosome Location	chr4:174020419-174020420
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs10519735	0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7684996	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949126	chr4:173466221-174051451	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:174016200-174027800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr4:174016600-174020800	Weak transcription	HUES64 Cell Line	embryonic stem cell
3	chr4:174020200-174020600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr4:174020400-174020600	Enhancers	Stomach Mucosa	stomach

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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