Variant report

Variant rs58689889
Chromosome Location chr12:42314063-42314064
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42311400-42315400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
2 chr12:42311600-42314200 Enhancers Fetal Adrenal Gland Adrenal Gland
3 chr12:42312200-42314400 Weak transcription Fetal Kidney kidney
4 chr12:42312200-42323600 Weak transcription Primary hematopoietic stem cells short term culture blood
5 chr12:42312400-42315000 Enhancers ES-I3 Cell Line embryonic stem cell
6 chr12:42312400-42326000 Weak transcription Psoas Muscle Psoas
7 chr12:42312600-42314600 Enhancers Fetal Brain Male brain
8 chr12:42312600-42314800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr12:42312800-42314800 Enhancers Fetal Lung lung
10 chr12:42313000-42314200 Flanking Active TSS HUES48 Cell Line embryonic stem cell
11 chr12:42313000-42314200 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
12 chr12:42313000-42314200 Flanking Active TSS Brain Germinal Matrix brain
13 chr12:42313000-42314600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr12:42313000-42315000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr12:42313000-42316000 Enhancers Fetal Stomach stomach
16 chr12:42313000-42321200 Weak transcription Primary hematopoietic stem cells blood
17 chr12:42313200-42314600 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
18 chr12:42313400-42314200 Flanking Active TSS HUES64 Cell Line embryonic stem cell
19 chr12:42313400-42314200 Active TSS Brain Substantia Nigra brain
20 chr12:42313400-42314400 Active TSS Right Atrium heart
21 chr12:42313400-42314600 Enhancers ES-WA7 Cell Line embryonic stem cell
22 chr12:42313400-42315400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr12:42313600-42314200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
24 chr12:42313600-42314200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
25 chr12:42313600-42314200 Active TSS Brain Angular Gyrus brain
26 chr12:42313600-42314200 Active TSS Brain Hippocampus Middle brain
27 chr12:42313600-42314200 Flanking Active TSS Fetal Brain Female brain
28 chr12:42313600-42314600 Enhancers H9 Cell Line embryonic stem cell
29 chr12:42313600-42314600 Active TSS Brain Anterior Caudate brain
30 chr12:42313800-42314200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
31 chr12:42313800-42314200 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
32 chr12:42313800-42314400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr12:42313800-42316400 Enhancers H1 Cell Line embryonic stem cell
34 chr12:42314000-42315200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr12:42314000-42316000 Enhancers HUES6 Cell Line embryonic stem cell
36 chr12:42314000-42316000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr12:42314000-42326000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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