The 2.0 version of rSNPBase

Variant report

Variant rs824727
Chromosome Location chr12:42486642-42486643
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42468400-42490200 Weak transcription Spleen Spleen
2 chr12:42469400-42491800 Weak transcription Ovary ovary
3 chr12:42470600-42491400 Weak transcription Duodenum Mucosa Duodenum
4 chr12:42471000-42504200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr12:42471800-42524400 Weak transcription Esophagus oesophagus
6 chr12:42472200-42487800 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr12:42472800-42489000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr12:42474000-42496000 Weak transcription Fetal Intestine Large intestine
9 chr12:42474200-42487800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr12:42474200-42490600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr12:42474600-42514400 Weak transcription Fetal Muscle Trunk muscle
12 chr12:42474600-42518800 Weak transcription Brain Anterior Caudate brain
13 chr12:42474800-42487600 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr12:42474800-42487600 Weak transcription Primary T killer memory cells from peripheral blood blood
15 chr12:42474800-42491800 Weak transcription Brain Inferior Temporal Lobe brain
16 chr12:42475000-42491800 Weak transcription Brain Substantia Nigra brain
17 chr12:42476000-42524400 Weak transcription Gastric stomach
18 chr12:42476200-42487000 Weak transcription Brain Cingulate Gyrus brain
19 chr12:42476200-42524400 Weak transcription Pancreas Pancrea
20 chr12:42476400-42487400 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr12:42476400-42487600 Weak transcription Primary T helper cells PMA-I stimulated --
22 chr12:42476400-42489800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr12:42476600-42523800 Weak transcription Hela-S3 cervix
24 chr12:42477600-42490400 Weak transcription Thymus Thymus
25 chr12:42478000-42489000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
26 chr12:42478000-42505000 Weak transcription Lung lung
27 chr12:42478400-42489600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr12:42478600-42487600 Weak transcription Primary T helper naive cells from peripheral blood blood
29 chr12:42478600-42511600 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr12:42479200-42496800 Weak transcription Psoas Muscle Psoas
31 chr12:42479400-42488600 Strong transcription Monocytes-CD14+_RO01746 blood
32 chr12:42479600-42505400 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr12:42479800-42489600 Weak transcription Fetal Thymus thymus
34 chr12:42480000-42489400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr12:42480000-42492400 Weak transcription iPS-18 Cell Line embryonic stem cell
36 chr12:42480200-42489400 Weak transcription Dnd41 blood
37 chr12:42480200-42489800 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr12:42480200-42492000 Weak transcription Brain Hippocampus Middle brain
39 chr12:42480200-42505600 Weak transcription Fetal Lung lung
40 chr12:42480200-42512000 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr12:42480600-42491600 Weak transcription Fetal Heart heart
42 chr12:42480600-42504600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr12:42480800-42487800 Weak transcription K562 blood
44 chr12:42481400-42487600 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr12:42481400-42490000 Weak transcription Liver Liver
46 chr12:42481600-42491200 Weak transcription Primary monocytes fromperipheralblood blood
47 chr12:42481800-42491400 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr12:42482200-42487400 Weak transcription Primary T cells fromperipheralblood blood
49 chr12:42482200-42489800 Weak transcription Primary neutrophils fromperipheralblood blood
50 chr12:42483000-42502800 Weak transcription HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015