The 2.0 version of rSNPBase

Variant report

Variant rs73281894
Chromosome Location chr12:42619975-42619976
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42552400-42620000 Weak transcription Fetal Brain Female brain
2 chr12:42555000-42628600 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr12:42568400-42623400 Weak transcription K562 blood
4 chr12:42568800-42630600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr12:42569600-42630800 Weak transcription Colonic Mucosa Colon
6 chr12:42569800-42631000 Weak transcription Gastric stomach
7 chr12:42575600-42628600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr12:42586800-42630000 Weak transcription Fetal Kidney kidney
9 chr12:42587200-42629600 Weak transcription Lung lung
10 chr12:42587400-42620000 Weak transcription Fetal Muscle Trunk muscle
11 chr12:42587800-42623400 Weak transcription Primary neutrophils fromperipheralblood blood
12 chr12:42588400-42628600 Weak transcription Thymus Thymus
13 chr12:42591600-42628200 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr12:42593200-42620000 Weak transcription Dnd41 blood
15 chr12:42602400-42628600 Weak transcription Spleen Spleen
16 chr12:42602400-42630800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr12:42602800-42628800 Weak transcription HepG2 liver
18 chr12:42603000-42620200 Weak transcription Primary B cells from cord blood blood
19 chr12:42603600-42625800 Weak transcription GM12878-XiMat blood
20 chr12:42604400-42620000 Weak transcription Liver Liver
21 chr12:42604400-42623400 Weak transcription Primary B cells from peripheral blood blood
22 chr12:42604400-42627400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr12:42604400-42628000 Weak transcription Placenta Placenta
24 chr12:42604600-42620000 Weak transcription Brain Germinal Matrix brain
25 chr12:42604600-42624400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr12:42604600-42626800 Weak transcription Hela-S3 cervix
27 chr12:42604600-42628800 Weak transcription Primary T cells fromperipheralblood blood
28 chr12:42604600-42629000 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr12:42607200-42620000 Weak transcription Fetal Thymus thymus
30 chr12:42607800-42630600 Weak transcription NHEK skin
31 chr12:42608000-42627400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr12:42608200-42620200 Weak transcription Fetal Intestine Small intestine
33 chr12:42608200-42624200 Weak transcription Duodenum Mucosa Duodenum
34 chr12:42608200-42628600 Weak transcription Brain Anterior Caudate brain
35 chr12:42608200-42630600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr12:42608400-42628600 Weak transcription Brain Angular Gyrus brain
37 chr12:42608400-42628600 Weak transcription Pancreas Pancrea
38 chr12:42608400-42629000 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr12:42609200-42620000 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr12:42609800-42631000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr12:42612000-42628600 Weak transcription Adipose Nuclei Adipose
42 chr12:42612200-42620000 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr12:42612200-42623400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr12:42612200-42628600 Weak transcription NHDF-Ad bronchial
45 chr12:42612200-42628800 Weak transcription Muscle Satellite Cultured Cells --
46 chr12:42612400-42627600 Weak transcription HSMM muscle
47 chr12:42613400-42620000 Weak transcription Osteobl bone
48 chr12:42613400-42624200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr12:42613400-42626800 Weak transcription Skeletal Muscle Male skeletal muscle
50 chr12:42613400-42629400 Weak transcription Right Ventricle heart

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Last update: Aug 31, 2015