The 2.0 version of rSNPBase

Variant report

Variant rs73281838
Chromosome Location chr12:42566529-42566530
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42539400-42577000 Weak transcription Aorta Aorta
2 chr12:42539400-42583200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr12:42539600-42574000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr12:42539600-42578400 Weak transcription Left Ventricle heart
5 chr12:42539600-42586000 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr12:42539800-42568600 Weak transcription Cortex derived primary cultured neurospheres brain
7 chr12:42539800-42569000 Weak transcription Fetal Kidney kidney
8 chr12:42539800-42582800 Weak transcription Spleen Spleen
9 chr12:42539800-42607800 Weak transcription Pancreas Pancrea
10 chr12:42540000-42574800 Weak transcription Brain Anterior Caudate brain
11 chr12:42547800-42610400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr12:42549400-42575000 Weak transcription Brain Angular Gyrus brain
13 chr12:42550600-42615800 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr12:42550800-42568400 Weak transcription Right Ventricle heart
15 chr12:42552000-42604000 Weak transcription Stomach Smooth Muscle stomach
16 chr12:42552200-42574800 Weak transcription Brain Inferior Temporal Lobe brain
17 chr12:42552200-42591200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr12:42552200-42613000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr12:42552400-42620000 Weak transcription Fetal Brain Female brain
20 chr12:42552600-42578800 Weak transcription Lung lung
21 chr12:42553400-42571200 Weak transcription Esophagus oesophagus
22 chr12:42553600-42590000 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr12:42554000-42607600 Weak transcription Rectal Smooth Muscle rectum
24 chr12:42554400-42578600 Weak transcription Thymus Thymus
25 chr12:42554600-42568200 Weak transcription Primary hematopoietic stem cells blood
26 chr12:42554600-42570800 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr12:42554600-42592200 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr12:42554800-42568800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr12:42554800-42571000 Weak transcription HepG2 liver
30 chr12:42555000-42566600 Weak transcription Primary neutrophils fromperipheralblood blood
31 chr12:42555000-42568800 Weak transcription HSMM muscle
32 chr12:42555000-42628600 Weak transcription Duodenum Smooth Muscle Duodenum
33 chr12:42555200-42566600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr12:42555200-42567000 Weak transcription Adipose Nuclei Adipose
35 chr12:42555200-42570200 Weak transcription Duodenum Mucosa Duodenum
36 chr12:42555200-42572600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr12:42555200-42574800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr12:42555200-42575400 Weak transcription NH-A brain
39 chr12:42555200-42576400 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr12:42555200-42586000 Weak transcription Fetal Lung lung
41 chr12:42555200-42590000 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr12:42555400-42566600 Weak transcription Primary monocytes fromperipheralblood blood
43 chr12:42555400-42569800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr12:42555400-42598000 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr12:42555600-42566600 Weak transcription Monocytes-CD14+_RO01746 blood
46 chr12:42555600-42569800 Weak transcription Dnd41 blood
47 chr12:42555600-42586400 Weak transcription Hela-S3 cervix
48 chr12:42556200-42578400 Weak transcription Primary T regulatory cells fromperipheralblood blood
49 chr12:42556600-42575000 Weak transcription Muscle Satellite Cultured Cells --
50 chr12:42556600-42578600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015