The 2.0 version of rSNPBase

Variant report

Variant rs73281851
Chromosome Location chr12:42579524-42579525
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42539400-42583200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
2 chr12:42539600-42586000 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr12:42539800-42582800 Weak transcription Spleen Spleen
4 chr12:42539800-42607800 Weak transcription Pancreas Pancrea
5 chr12:42547800-42610400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr12:42550600-42615800 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr12:42552000-42604000 Weak transcription Stomach Smooth Muscle stomach
8 chr12:42552200-42591200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr12:42552200-42613000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr12:42552400-42620000 Weak transcription Fetal Brain Female brain
11 chr12:42553600-42590000 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr12:42554000-42607600 Weak transcription Rectal Smooth Muscle rectum
13 chr12:42554600-42592200 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr12:42555000-42628600 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr12:42555200-42586000 Weak transcription Fetal Lung lung
16 chr12:42555200-42590000 Weak transcription Rectal Mucosa Donor 29 rectum
17 chr12:42555400-42598000 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr12:42555600-42586400 Weak transcription Hela-S3 cervix
19 chr12:42556800-42613200 Weak transcription HMEC breast
20 chr12:42557000-42581800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr12:42557000-42604000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr12:42557200-42580400 Weak transcription GM12878-XiMat blood
23 chr12:42557200-42606800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr12:42558000-42602400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr12:42561000-42580400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr12:42563200-42608000 Weak transcription Small Intestine intestine
27 chr12:42565400-42587400 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr12:42566000-42588600 Weak transcription Placenta Placenta
29 chr12:42568400-42580000 Weak transcription Primary B cells from peripheral blood blood
30 chr12:42568400-42584400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr12:42568400-42623400 Weak transcription K562 blood
32 chr12:42568600-42607800 Weak transcription Right Ventricle heart
33 chr12:42568800-42630600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr12:42569200-42586400 Weak transcription Fetal Kidney kidney
35 chr12:42569600-42630800 Weak transcription Colonic Mucosa Colon
36 chr12:42569800-42631000 Weak transcription Gastric stomach
37 chr12:42570000-42581600 Weak transcription Ovary ovary
38 chr12:42570400-42583800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr12:42570400-42586000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr12:42570800-42589400 Weak transcription HSMMtube muscle
41 chr12:42571200-42579800 Weak transcription Primary B cells from cord blood blood
42 chr12:42571400-42586000 Weak transcription Adipose Nuclei Adipose
43 chr12:42571400-42586200 Weak transcription Primary T cells fromperipheralblood blood
44 chr12:42571400-42591200 Weak transcription Primary hematopoietic stem cells blood
45 chr12:42571400-42597600 Weak transcription Esophagus oesophagus
46 chr12:42571600-42581600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr12:42571600-42581600 Weak transcription A549 lung
48 chr12:42571600-42585600 Weak transcription Fetal Stomach stomach
49 chr12:42571600-42586000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
50 chr12:42571600-42586000 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015