The 2.0 version of rSNPBase

Variant report

Variant rs73281820
Chromosome Location chr12:42549337-42549338
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42539200-42552200 Weak transcription HSMM muscle
2 chr12:42539200-42563800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr12:42539400-42551400 Weak transcription Primary B cells from cord blood blood
4 chr12:42539400-42551800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr12:42539400-42554000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr12:42539400-42554200 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr12:42539400-42556000 Weak transcription Muscle Satellite Cultured Cells --
8 chr12:42539400-42577000 Weak transcription Aorta Aorta
9 chr12:42539400-42583200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr12:42539600-42550200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr12:42539600-42550800 Weak transcription Primary T cells from cord blood blood
12 chr12:42539600-42550800 Weak transcription Monocytes-CD14+_RO01746 blood
13 chr12:42539600-42551600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr12:42539600-42551800 Weak transcription Primary T regulatory cells fromperipheralblood blood
15 chr12:42539600-42552200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr12:42539600-42552400 Weak transcription HUVEC blood vessel
17 chr12:42539600-42553600 Weak transcription Adipose Nuclei Adipose
18 chr12:42539600-42553800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr12:42539600-42553800 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr12:42539600-42555800 Weak transcription Brain Substantia Nigra brain
21 chr12:42539600-42556200 Weak transcription HSMMtube muscle
22 chr12:42539600-42574000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr12:42539600-42578400 Weak transcription Left Ventricle heart
24 chr12:42539600-42586000 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr12:42539800-42550600 Weak transcription Fetal Lung lung
26 chr12:42539800-42550800 Weak transcription Primary hematopoietic stem cells short term culture blood
27 chr12:42539800-42551600 Weak transcription GM12878-XiMat blood
28 chr12:42539800-42551800 Weak transcription Primary monocytes fromperipheralblood blood
29 chr12:42539800-42551800 Weak transcription Primary T helper cells fromperipheralblood blood
30 chr12:42539800-42553000 Weak transcription Hela-S3 cervix
31 chr12:42539800-42554200 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr12:42539800-42568600 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr12:42539800-42569000 Weak transcription Fetal Kidney kidney
34 chr12:42539800-42582800 Weak transcription Spleen Spleen
35 chr12:42539800-42607800 Weak transcription Pancreas Pancrea
36 chr12:42540000-42550600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr12:42540000-42552200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr12:42540000-42552200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr12:42540000-42553800 Weak transcription Primary B cells from peripheral blood blood
40 chr12:42540000-42556000 Weak transcription Fetal Intestine Small intestine
41 chr12:42540000-42574800 Weak transcription Brain Anterior Caudate brain
42 chr12:42541200-42553600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr12:42543800-42551800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr12:42545200-42553800 Weak transcription Primary T cells fromperipheralblood blood
45 chr12:42545400-42554200 Weak transcription Primary hematopoietic stem cells blood
46 chr12:42545600-42553200 Weak transcription NH-A brain
47 chr12:42546000-42564400 Weak transcription Fetal Muscle Trunk muscle
48 chr12:42546400-42553800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr12:42546600-42553800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr12:42547200-42553000 Weak transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015