The 2.0 version of rSNPBase

Variant report

Variant rs73285621
Chromosome Location chr12:42715992-42715993
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42693600-42719000 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr12:42696200-42718800 Weak transcription Brain Hippocampus Middle brain
3 chr12:42697000-42718800 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr12:42697400-42718000 Weak transcription HepG2 liver
5 chr12:42699600-42718800 Weak transcription HUVEC blood vessel
6 chr12:42699800-42718200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr12:42700800-42716400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr12:42701200-42718600 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr12:42701400-42717400 Weak transcription Pancreas Pancrea
10 chr12:42701800-42718600 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr12:42701800-42718800 Weak transcription Brain Angular Gyrus brain
12 chr12:42701800-42719400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr12:42702200-42718600 Weak transcription Brain Substantia Nigra brain
14 chr12:42702600-42718800 Weak transcription Colon Smooth Muscle Colon
15 chr12:42703000-42717400 Strong transcription Breast Myoepithelial Primary Cells Breast
16 chr12:42703800-42718800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr12:42704200-42718400 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr12:42705000-42718000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr12:42705200-42718600 Weak transcription H9 Cell Line embryonic stem cell
20 chr12:42705200-42718600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr12:42705200-42719000 Weak transcription HSMMtube muscle
22 chr12:42705400-42718400 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr12:42705400-42719200 Weak transcription Fetal Intestine Small intestine
24 chr12:42705600-42719200 Weak transcription Psoas Muscle Psoas
25 chr12:42705600-42719400 Weak transcription ES-WA7 Cell Line embryonic stem cell
26 chr12:42705600-42719400 Weak transcription Small Intestine intestine
27 chr12:42705800-42716400 Weak transcription NHDF-Ad bronchial
28 chr12:42705800-42718400 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr12:42705800-42718600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr12:42705800-42719400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr12:42706000-42719400 Weak transcription Aorta Aorta
32 chr12:42706000-42719600 Weak transcription Spleen Spleen
33 chr12:42706200-42717400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr12:42707000-42718600 Weak transcription NHLF lung
35 chr12:42707200-42717200 Strong transcription Skeletal Muscle Female skeletal muscle
36 chr12:42707200-42718600 Weak transcription Rectal Smooth Muscle rectum
37 chr12:42707600-42718600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr12:42707600-42718600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr12:42707800-42718400 Weak transcription A549 lung
40 chr12:42707800-42718600 Weak transcription Muscle Satellite Cultured Cells --
41 chr12:42707800-42718600 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr12:42707800-42718600 Weak transcription HMEC breast
43 chr12:42707800-42718800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
44 chr12:42707800-42718800 Weak transcription NH-A brain
45 chr12:42707800-42719200 Weak transcription Right Ventricle heart
46 chr12:42707800-42719400 Weak transcription Colonic Mucosa Colon
47 chr12:42708000-42718400 Weak transcription NHEK skin
48 chr12:42709000-42719400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr12:42709000-42719400 Weak transcription Gastric stomach
50 chr12:42709200-42718600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015