The 2.0 version of rSNPBase

Variant report

Variant rs11829039
Chromosome Location chr12:42811239-42811240
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42720800-42844400 Weak transcription Small Intestine intestine
2 chr12:42738200-42823200 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr12:42767200-42836200 Weak transcription Esophagus oesophagus
4 chr12:42770200-42815800 Weak transcription Fetal Lung lung
5 chr12:42770400-42816600 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr12:42780200-42836000 Weak transcription Rectal Smooth Muscle rectum
7 chr12:42783000-42836000 Weak transcription Lung lung
8 chr12:42785400-42836000 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr12:42789600-42812200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr12:42789600-42836200 Weak transcription Pancreas Pancrea
11 chr12:42793800-42840400 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr12:42795000-42813600 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr12:42795400-42834600 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr12:42795600-42811400 Weak transcription Adipose Nuclei Adipose
15 chr12:42795600-42811800 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr12:42795600-42820400 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr12:42795600-42820600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr12:42795600-42825800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr12:42795600-42834400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr12:42795800-42821800 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr12:42795800-42836000 Weak transcription Thymus Thymus
22 chr12:42796000-42812800 Weak transcription Osteobl bone
23 chr12:42796000-42813400 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr12:42796000-42819600 Weak transcription HUES64 Cell Line embryonic stem cell
25 chr12:42796000-42820400 Weak transcription NHEK skin
26 chr12:42796000-42823600 Weak transcription Fetal Muscle Trunk muscle
27 chr12:42796000-42825600 Weak transcription Duodenum Mucosa Duodenum
28 chr12:42796000-42825800 Weak transcription Left Ventricle heart
29 chr12:42796000-42833200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr12:42796000-42834400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr12:42796000-42835000 Weak transcription HepG2 liver
32 chr12:42796000-42835800 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr12:42796000-42836200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr12:42796000-42836200 Weak transcription Fetal Stomach stomach
35 chr12:42796000-42836400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr12:42796000-42838000 Weak transcription HSMMtube muscle
37 chr12:42796200-42813600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr12:42796200-42826000 Weak transcription Stomach Smooth Muscle stomach
39 chr12:42796400-42813800 Weak transcription GM12878-XiMat blood
40 chr12:42796400-42815400 Weak transcription Muscle Satellite Cultured Cells --
41 chr12:42797000-42812200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
42 chr12:42797000-42813400 Weak transcription Primary T helper cells PMA-I stimulated --
43 chr12:42797000-42815800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr12:42797000-42820600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr12:42799600-42813600 Weak transcription Hela-S3 cervix
46 chr12:42799600-42815600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr12:42799600-42816000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr12:42799800-42820600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr12:42799800-42825400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
50 chr12:42801000-42814800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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Last update: Aug 31, 2015