The 2.0 version of rSNPBase

Variant report

Variant rs824733
Chromosome Location chr12:42530639-42530640
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:42493000-42534400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr12:42505800-42537000 Weak transcription Fetal Stomach stomach
3 chr12:42505800-42537000 Weak transcription Lung lung
4 chr12:42512000-42537400 Weak transcription Ovary ovary
5 chr12:42512400-42537000 Weak transcription Placenta Placenta
6 chr12:42513000-42537000 Weak transcription Primary T cells fromperipheralblood blood
7 chr12:42513200-42537200 Weak transcription Primary T cells from cord blood blood
8 chr12:42519000-42537000 Weak transcription Right Atrium heart
9 chr12:42519200-42537400 Weak transcription Small Intestine intestine
10 chr12:42519600-42537200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr12:42519800-42536800 Weak transcription Primary hematopoietic stem cells blood
12 chr12:42519800-42537000 Weak transcription Primary B cells from cord blood blood
13 chr12:42522600-42537000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr12:42524000-42537200 Weak transcription Aorta Aorta
15 chr12:42524600-42537000 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr12:42524800-42534000 Weak transcription Primary T helper cells PMA-I stimulated --
17 chr12:42524800-42537000 Weak transcription Fetal Kidney kidney
18 chr12:42524800-42537000 Weak transcription Gastric stomach
19 chr12:42524800-42537200 Weak transcription Left Ventricle heart
20 chr12:42524800-42537200 Weak transcription Psoas Muscle Psoas
21 chr12:42525000-42531600 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr12:42525400-42535800 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr12:42525600-42534800 Weak transcription HSMM muscle
24 chr12:42525600-42536800 Weak transcription HUVEC blood vessel
25 chr12:42527800-42531000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
26 chr12:42529000-42534400 Weak transcription Duodenum Mucosa Duodenum
27 chr12:42529000-42537000 Weak transcription Fetal Intestine Small intestine
28 chr12:42529200-42534400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr12:42529200-42534400 Weak transcription NH-A brain
30 chr12:42529600-42532800 Weak transcription GM12878-XiMat blood
31 chr12:42529600-42534400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr12:42529600-42534600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr12:42529600-42534600 Weak transcription Osteobl bone
34 chr12:42529600-42535600 Weak transcription Monocytes-CD14+_RO01746 blood
35 chr12:42529600-42537000 Weak transcription NHLF lung
36 chr12:42529800-42531800 Weak transcription Primary monocytes fromperipheralblood blood
37 chr12:42529800-42534600 Weak transcription Muscle Satellite Cultured Cells --
38 chr12:42529800-42534600 Weak transcription NHDF-Ad bronchial
39 chr12:42529800-42536600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr12:42529800-42537000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr12:42530000-42534600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr12:42530000-42535800 Weak transcription Hela-S3 cervix
43 chr12:42530200-42533200 Weak transcription A549 lung
44 chr12:42530200-42534600 Weak transcription NHEK skin
45 chr12:42530400-42531800 Weak transcription Fetal Muscle Trunk muscle
46 chr12:42530400-42534400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr12:42530400-42534400 Weak transcription HMEC breast
48 chr12:42530400-42534600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr12:42530600-42534400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015