Variant report

Variant rs58725641
Chromosome Location chr3:53754898-53754899
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:30 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:53740200-53764400 Weak transcription Brain Cingulate Gyrus brain
2 chr3:53742600-53778000 Weak transcription Pancreas Pancrea
3 chr3:53744200-53764600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr3:53744400-53756600 Weak transcription Lung lung
5 chr3:53744400-53758600 Weak transcription Stomach Smooth Muscle stomach
6 chr3:53744400-53763800 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr3:53744600-53755000 Weak transcription Brain Anterior Caudate brain
8 chr3:53744600-53755000 Weak transcription Brain Inferior Temporal Lobe brain
9 chr3:53744600-53756400 Weak transcription Liver Liver
10 chr3:53744600-53761200 Weak transcription Duodenum Mucosa Duodenum
11 chr3:53745200-53762800 Strong transcription Fetal Intestine Large intestine
12 chr3:53748600-53756200 Weak transcription Fetal Brain Male brain
13 chr3:53750000-53755200 Weak transcription Left Ventricle heart
14 chr3:53750400-53755000 Weak transcription NHDF-Ad bronchial
15 chr3:53750400-53755200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr3:53750400-53755200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr3:53750600-53755000 Weak transcription Osteobl bone
18 chr3:53751200-53755000 Weak transcription NH-A brain
19 chr3:53752400-53756400 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr3:53752400-53756600 Weak transcription Fetal Lung lung
21 chr3:53752800-53755800 Weak transcription H9 Cell Line embryonic stem cell
22 chr3:53753200-53761000 Weak transcription Spleen Spleen
23 chr3:53753400-53760800 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr3:53753600-53755200 Weak transcription Fetal Thymus thymus
25 chr3:53753600-53766200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
26 chr3:53753800-53755200 Weak transcription Esophagus oesophagus
27 chr3:53753800-53755200 Weak transcription Fetal Intestine Small intestine
28 chr3:53753800-53756200 Enhancers Pancreatic Islets Pancreatic Islet
29 chr3:53754200-53763600 Weak transcription Brain Hippocampus Middle brain
30 chr3:53754600-53756200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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